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Tag protein-rna [14 articles]

Recent papers classified by the tag protein-rna.
  • Protein-RNA interactions: exploring binding patterns with a three-dimensional superposition analysis of high resolution structures.
    Bioinformatics (11 September 2006)
    by N Morozova, J Allers, J Myers, Y Shamoo
    posted to protein-rna by yoonk on 2008-10-27 14:12:11 as ** along with 4 people and 2 groups kaarsinogen marcius eckart_bindewald medic0747 BioinfoCIPF SGU-CIPF
  • notes Nanoparticle-based bio-bar codes for the ultrasensitive detection of proteins.
    Science, Vol. 301, No. 5641. (26 September 2003), pp. 1884-1886.
    by JM Nam, CS Thaxton, CA Mirkin
    posted to protein-rna by perrywoo on 2006-04-15 00:24:43 as ** along with 2 people guhjy stsaft
  • Kinetic studies of RNA-protein interactions using surface plasmon resonance
    Methods, Vol. 26, No. 2. (February 2002), pp. 95-104.
    by Phinikoula S Katsamba, Sungmin Park, Ite A Laird-Offringa
    posted to protein-rna by perrywoo on 2006-02-28 21:09:51 as **
  • Quantum-Dot-Based Nanosensor for RRE IIB RNA-Rev Peptide Interaction Assay.
    J Am Chem Soc, Vol. 128, No. 16. (26 April 2006), pp. 5324-5325.
    by CY Zhang, LW Johnson
    posted to protein-rna by perrywoo on 2006-04-26 20:31:46 as **
  • BindN: a web-based tool for efficient prediction of DNA and RNA binding sites in amino acid sequences.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by L Wang, SJ Brown
    posted to dna_binding protein-dna_interaction protein-rna by kaarsinogen on 2007-06-04 18:06:47 as ***
  • Prediction of RNA binding sites in proteins from amino acid sequence
    RNA, Vol. 12, No. 8. (1 August 2006), pp. 1450-1462.
    by Michael Terribilini, Jae-Hyung Lee, Changhui Yan, Robert L Jernigan, Vasant Honavar, Drena Dobbs
    posted to protein-rna by kaarsinogen on 2008-03-07 20:32:01 as ** along with 1 person bootsy
  • Prediction of RNA binding sites in a protein using SVM and PSSM profile
    Proteins: Structure, Function, and Bioinformatics, Vol. 71, No. 1. (2008), pp. 189-194.
    by Manish Kumar, Michael M Gromiha, GPS Raghava
    posted to protein-rna svm by kaarsinogen on 2008-03-07 20:43:00 as **
  • Predicting RNA-binding sites from the protein structure based on electrostatics, evolution and geometry
    Nucl. Acids Res. (14 February 2008), gkn008.
    by Yao C Chen, Carmay Lim
    posted to protein-rna by kaarsinogen on 2008-03-07 20:45:23 as ** along with 3 people and 1 group sunhwan sobolevnrm marck baker-group
  • PRINTR: Prediction of RNA binding sites in proteins using SVM and profiles
    Amino Acids, Vol. 35, No. 2., pp. 295-302.
    by Y Wang, Z Xue, G Shen, J Xu
    posted to protein-rna by kaarsinogen on 2008-03-07 20:34:06 as **
  • Prediction of RNA-binding proteins from primary sequence by a support vector machine approach
    RNA, Vol. 10, No. 3. (1 March 2004), pp. 355-368.
    by Lian YI Han, Cong ZHONG Cai, Siew LIN Lo, Maxey C Chung, Yu ZONG Chen
    posted to protein-rna svm by kaarsinogen on 2008-03-17 15:47:12 as **
  • RNABindR: a server for analyzing and predicting RNA-binding sites in proteins.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (July 2007)
    by M Terribilini, JD Sander, JH Lee, P Zaback, RL Jernigan, V Honavar, D Dobbs
    posted to protein-rna by kaarsinogen on 2008-03-07 20:33:24 as **
  • Support vector machines for predicting rRNA-, RNA-, and DNA-binding proteins from amino acid sequence
    Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, Vol. 1648, No. 1-2. (30 May 2003), pp. 127-133.
    by Yu-Dong Cai, Shuo L Lin
    posted to protein-rna svm by kaarsinogen on 2008-03-17 15:43:26 as **
  • Protein-RNA interactions: a structural analysis
    Nucl. Acids Res., Vol. 29, No. 4. (15 February 2001), pp. 943-954.
    by Susan Jones, David T Daley, Nicholas M Luscombe, Helen M Berman, Janet M Thornton
    posted to interaction protein-rna protein_structure by kaarsinogen on 2006-11-08 17:45:43 as *** along with 3 people jarasch medic0747 winterschlaefer
  • Predicting rRNA-, RNA-, and DNA-binding proteins from primary structure with support vector machines
    Journal of Theoretical Biology, Vol. 240, No. 2. (21 May 2006), pp. 175-184.
    by Xiaojing Yu, Jianping Cao, Yudong Cai, Tieliu Shi, Yixue Li
    posted to protein-dna_interaction protein-rna svm by kaarsinogen on 2008-03-17 15:51:01 as **
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