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Tag probe-design [16 articles]

Recent papers classified by the tag probe-design.
  • Probe selection for DNA microarrays using OligoWiz.
    Nat Protoc, Vol. 2, No. 11. (2007), pp. 2677-2691.
    by R Wernersson, AS Juncker, HB Nielsen
    posted to microarray oligonucleotide probe-design probe-selection signal-intensity by niallhaslam on 2007-11-29 10:33:36 as ***
  • Genotypic resistance testing in HIV by arrayed primer extension.
    Anal Bioanal Chem (18 January 2008)
    by Michaela Schanné, Jochen Bodem, Aslihan Gerhold-Ay, Anette Jacob, Kurt Fellenberg, Hans-Georg G Kräusslich, Jörg D Hoheisel
    posted to genotyping microarray primer-design probe-design probe-selection resequencing by niallhaslam on 2008-04-01 10:33:24 as *****
  • notes Mprobe 2.0: computer-aided probe design for oligonucleotide microarray.
    Appl Bioinformatics, Vol. 5, No. 3. (2006), pp. 181-186.
    by W Li, X Ying
    posted to microarray probe-design by GeeSharpMinor on 2007-05-24 15:40:29 as **
  • notes Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays
    Nucl. Acids Res., Vol. 31, No. 13. (1 July 2003), pp. 3491-3496.
    by Henrik B Nielsen, Rasmus Wernersson, Steen Knudsen
    posted to microarray probe-design by GeeSharpMinor on 2007-05-22 15:56:44 as *
  • notes Picky: oligo microarray design for large genomes.
    Bioinformatics, Vol. 20, No. 17. (22 November 2004), pp. 2893-2902.
    by HH Chou, AP Hsia, DL Mooney, PS Schnable
    posted to microarray probe-design by GeeSharpMinor on 2007-05-24 15:39:22 as **
  • notes A fast and flexible approach to oligonucleotide probe design for genomes and gene families.
    Bioinformatics (28 March 2007)
    by Shengzhong Feng, Elisabeth R M R Tillier
    posted to microarray probe-design by GeeSharpMinor on 2007-05-30 00:02:43 as ***** along with 1 person guhjy
  • Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray.
    Genome Biol, Vol. 4, No. 2. (2003)
    by Z Bozdech, J Zhu, MP Joachimiak, FE Cohen, B Pulliam, JL DeRisi
    posted to malaria microarray probe-design transcriptome by GeeSharpMinor on 2007-05-24 05:38:32 as *** along with 1 person george_g
  • Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy
    BMC Bioinformatics, Vol. 8 (19 September 2007), 350.
    by Guangan Hu, Manuel Llinas, Jingguang Li, Peter R Preiser, Zbynek Bozdech
    posted to malaria microarray probe-design by GeeSharpMinor on 2008-08-06 17:56:58 as ** along with 2 people chrisamiller stsaft
  • Design of long oligonucleotide probes for functional gene detection in a microbial community
    Bioinformatics, Vol. 21, No. 22. (15 November 2005), pp. 4092-4100.
    by Won-Hyong Chung, Sung-Keun Rhee, Jin-Woo Bae, Zhe-Xue Quan, Yong-Ha Park
    posted to microarray probe-design by GeeSharpMinor on 2007-06-06 23:03:20 as ***** along with 3 people stsaft cthachuk mcox
  • Selection of optimal oligonucleotide probes for microarrays using multiple criteria, global alignment and parameter estimation
    Nucleic Acids Research, Vol. 33, No. 19. (2005), pp. 6114-6123.
    by Xingyuan Li, Zhili He, Jizhong Zhou
    posted to microarray probe-design by GeeSharpMinor on 2007-05-23 18:59:32 as *** along with 2 people stsaft cthachuk
  • notes OligoWiz 2.0--integrating sequence feature annotation into the design of microarray probes.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005)
    by R Wernersson, HB Nielsen
    posted to microarray probe-design by GeeSharpMinor on 2007-05-23 18:05:54 as ** along with 2 people bertelsen stsaft
  • GeneDesign: Rapid, automated design of multikilobase synthetic genes
    Genome Res., Vol. 16, No. 4. (1 April 2006), pp. 550-556.
    by Sarah M Richardson, Sarah J Wheelan, Robert M Yarrington, Jef D Boeke
    posted to gene-synthesis oligo probe-design by cthachuk on 2006-09-10 22:30:01 as ** along with 1 person Olaf_Ilzins
  • YODA: selecting signature oligonucleotides
    Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1365-1370.
    by Eric K Nordberg
    posted to oligo probe-design by cthachuk on 2006-09-10 21:52:15 as ** along with 2 people stsaft nedwards
  • OligoArray: genome-scale oligonucleotide design for microarrays
    Bioinformatics, Vol. 18, No. 3. (1 March 2002), pp. 486-487.
    by Jean-Marie Rouillard, Christopher J Herbert, Michael Zuker
    posted to oligo probe-design by cthachuk on 2006-09-10 22:25:05 as **
  • Rational design of DNA sequences for nanotechnology, microarrays and molecular computers using Eulerian graphs
    Nucl. Acids Res., Vol. 32, No. 15. (27 August 2004), pp. 4630-4645.
    by Petr Pancoska, Zdenek Moravek, Ute M Moll
    posted to euler-graphs oligo probe-design by cthachuk on 2006-09-10 21:59:11 as ** along with 1 person stsaft
  • Design of nucleic acid sequences for DNA computing based on a thermodynamic approach
    Nucleic Acids Research, Vol. 33, No. 3. (2005), pp. 903-911.
    by Fumiaki Tanaka, Atsushi Kameda, Masahito Yamamoto, Azuma Ohuchi
    posted to oligo probe-design by cthachuk on 2006-09-10 21:55:17 as ** along with 1 person stsaft
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