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Tag predictions [51 articles]

Recent papers classified by the tag predictions.
  • Learning overhypotheses with hierarchical Bayesian models
    Developmental Science, Vol. 10, No. 3. (May 2007), pp. 307-321.
    by Kemp, Charles, Perfors, Amy, Tenenbaum, B Joshua
    posted to reasoning predictions overhypotheses learning intelligence induction hierarchical cognition by ruzel on 2008-10-15 20:18:36 as read along with 3 people linhares briordan Cavadini
  • Optimal Predictions in Everyday Cognition
    Psychological Science, Vol. 17, No. 9. (September 2006), pp. 767-773.
    by Griffiths, L Thomas, Tenenbaum, B Joshua
    posted to cognition inductive inference intelligence predictions psychology reasoning by ruzel on 2008-07-30 19:59:41 as read
  • The in(<I>a</I>/tan/beta) index: How to calculate it and how to use it within the topmodel framework
    Hydrological Processes, Vol. 9, No. 2. (1995), pp. 161-182.
    by PF Quinn, KJ Beven, R Lamb
    posted to analysis and digital model moisture predictions soil spatial temporal terrain topmodel by ricckli on 2008-07-27 18:34:18 as **
  • Predicting antibiotic resistance
    Nature Reviews Microbiology, Vol. 5, No. 12., pp. 958-965.
    by José L Martínez, Fernando Baquero, Dan I Andersson
    posted to antibiotics bacteria model predictions by osilander on 2008-04-16 16:45:18 as ** along with 3 people gwenknight cjeans guhjy
  • STRING: known and predicted protein-protein associations, integrated and transferred across organisms.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by C von Mering, LJ Jensen, B Snel, SD Hooper, M Krupp, M Foglierini, N Jouffre, MA Huynen, P Bork
    posted to database predictions protein-protein by nickluscombe on 2006-04-18 17:03:51 as ** along with 7 people and 2 groups kuhn lfriedl koller iris_2001 Evangelia larsjuhljensen carlk kdl EBI-regulation
  • Predicting gene expression from sequence.
    Cell, Vol. 117, No. 2. (16 April 2004), pp. 185-198.
    by MA Beer, S Tavazoie
    posted to bayesian expression predictions regulation tfbs by nickluscombe on 2006-06-30 12:16:01 as ** along with 9 people and 5 groups tharris ana xwbcn adepace noano koller jrest phoenixzxl klo C. elegans / WormBase structural_bioinformatics Bioinformatics EisenLab EBI-regulation
  • A probabilistic functional network of yeast genes.
    Science, Vol. 306, No. 5701. (26 November 2004), pp. 1555-1558.
    by I Lee, SV Date, AT Adai, EM Marcotte
    posted to predictions protein-protein by nickluscombe on 2006-04-18 16:58:59 as ** along with 17 people and 3 groups aelef jiny csgillespie irenas lfriedl ccots balajis nuke2005 eweaver opheliav reidy dbgrant kintoki balicea svdate ellakat roys dbk-lab kdl EBI-regulation
  • STRING: a database of predicted functional associations between proteins.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 258-261.
    by C von Mering, M Huynen, D Jaeggi, S Schmidt, P Bork, B Snel
    posted to database predictions protein-protein by nickluscombe on 2006-04-18 17:02:36 as ** along with 3 people and 2 groups kuhn lfriedl eweaver kdl EBI-regulation
  • A Bayesian networks approach for predicting protein-protein interactions from genomic data.
    Science, Vol. 302, No. 5644. (17 October 2003), pp. 449-453.
    by R Jansen, H Yu, D Greenbaum, Y Kluger, NJ Krogan, S Chung, A Emili, M Snyder, JF Greenblatt, M Gerstein
    posted to bayesian network predictions protein-protein by nickluscombe on 2006-04-18 16:53:57 as ** along with 19 people and 2 groups Robinder lfriedl balajis opheliav yuval wnpx ruvido raiyar massivemayhem kdang dbgrant nedwards karfunkel Evangelia shung phoenixzxl penpen926 carlk frohike kdl EBI-regulation
  • Computational biology: Protein predictions
    Nature (14 October 2007)
    by Eleanor J Dodson
    posted to predictions protein-structure by mingzhi on 2007-11-12 07:26:30 as ** along with 5 people and 1 group dullhunk massivemayhem cjeans zwang saunders libr
  • Predicting DNA recognition by Cys2His2 zinc finger proteins.
    Bioinformatics (Oxford, England) (13 November 2008)
    by Anton V V Persikov, Robert Osada, Mona Singh
    posted to zincfinger svm predictions litreview2008 interactions dna by kgutwin on 2008-11-19 23:02:08 as **** along with 3 people wilbur hugowill aalibes
  • Genome-wide prediction of SH2 domain targets using structural information and the FoldX algorithm.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    by IE Sánchez, P Beltrao, F Stricher, J Schymkowitz, J Ferkinghoff-Borg, F Rousseau, L Serrano
    posted to foldx genome interactions predictions statpot structure by kgutwin on 2008-06-20 21:20:47 as *** along with 2 people eskay cabbagesofdoom
  • Predicting helix orientation for coiled-coil dimers.
    Proteins, Vol. 72, No. 3. (15 August 2008), pp. 1048-1065.
    by JR Apgar, KN Gutwin, AE Keating
    posted to antiparallel coiled-coils orientation predictions structure by kgutwin on 2008-08-11 22:32:30 as read
  • A Historical Perspective of Template-Based Protein Structure Prediction
    Protein Structure Prediction (2008), pp. 3-42.
    by Jun-Tao Guo, Kyle Ellrott, Ying Xu
    posted to threading structure review predictions modeling by kgutwin on 2008-11-20 20:34:44 as **
  • PIPs: human protein-protein interaction prediction database.
    Nucleic acids research (6 November 2008)
    by Mark D D McDowall, Michelle S S Scott, Geoffrey J J Barton
    posted to predictions litreview2008 interactions database by kgutwin on 2008-11-19 23:02:57 as ** along with 4 people cerca renatomilani higueruelo grahamc
  • EcID. A database for the inference of functional interactions in E. coli.
    Nucleic acids research (12 November 2008)
    by Andres Leon L Eduardo, Ezkurdia Iakes, García Beatriz, Valencia Alfonso, Juan David
    posted to predictions litreview2008 interactions database by kgutwin on 2008-11-19 23:02:33 as **
  • MULTIPROSPECTOR: an algorithm for the prediction of protein-protein interactions by multimeric threading.
    Proteins, Vol. 49, No. 3. (15 November 2002), pp. 350-364.
    by L Lu, H Lu, J Skolnick
    posted to interactions multiprospector predictions statpot threading by kgutwin on 2008-08-15 17:05:47 as read along with 6 people and 5 groups ana bicko chad_davis marcius sangeetha ruvido structural_bioinformatics Bioinformatics insilicodrug BioinfoCIPF SGU-CIPF
  • Training Set Expansion: An Approach to Improving the Reconstruction of Biological Networks from Limited and Uneven Reliable Interactions.
    Bioinformatics (Oxford, England) (17 November 2008)
    by Kevin Y Y Yip, Mark Gerstein
    posted to predictions litreview2008 interactions by kgutwin on 2008-11-19 23:01:28 as *** along with 1 person grahamc
  • Chirality of coiled coils: elasticity matters.
    Physical review letters, Vol. 100, No. 3. (25 January 2008)
    by S Neukirch, A Goriely, AC Hausrath
    posted to coiled-coils predictions structure by kgutwin on 2008-08-11 21:41:16 as **
  • COILCHECK: an interactive server for the analysis of interface regions in coiled coils.
    Protein and peptide letters, Vol. 15, No. 1. (2008), pp. 33-38.
    by V Alva, DP Syamala Devi, R Sowdhamini
    posted to coiled-coils predictions by kgutwin on 2008-08-11 21:42:52 as *
  • notes Prediction of protein-protein interactions by combining structure and sequence conservation in protein interfaces
    Bioinformatics, Vol. 21, No. 12. (15 June 2005), pp. 2850-2855.
    by Selim A Aytuna, Attila Gursoy, Ozlem Keskin
    posted to docking interactions multiprot predictions structure threading by kgutwin on 2008-08-15 19:45:28 as ** along with 4 people cjeans selrac higueruelo bicko
  • STRING 8--a global view on proteins and their functional interactions in 630 organisms
    Nucl. Acids Res. (21 October 2008), gkn760.
    by Lars J Jensen, Michael Kuhn, Manuel Stark, Samuel Chaffron, Chris Creevey, Jean Muller, Tobias Doerks, Philippe Julien, Alexander Roth, Milan Simonovic, Peer Bork, Christian Mering
    posted to predictions litreview2008 interactions database by kgutwin on 2008-11-19 23:03:13 as **** along with 1 person biehl
  • Selectional and Mutational Scope of Peptides Sequestering the Jun-Fos Coiled-Coil Domain.
    Journal of molecular biology (17 May 2008)
    by Urs B B Hagemann, Jody M M Mason, Kristian M M Müller, Katja M M Arndt
    posted to predictions litreview2008 interactions coiled-coils by kgutwin on 2008-11-19 22:22:03 as ** along with 2 people marck kevinchannon
  • The interactome: Predicting the protein-protein interactions in cells.
    Cellular & molecular biology letters (6 October 2008)
    by Dariusz Plewczyński, Krzysztof Ginalski
    posted to review predictions litreview2008 interactions by kgutwin on 2008-11-19 23:03:36 as **
  • Development of unified statistical potentials describing protein-protein interactions.
    Biophys J, Vol. 84, No. 3. (March 2003), pp. 1895-1901.
    by H Lu, L Lu, J Skolnick
    posted to interactions multiprospector predictions statpot structure by kgutwin on 2008-08-15 17:05:08 as read along with 7 people bicko mdimmic chad_davis cjeans selrac iris_2001 wilbur
  • Progress and challenges in protein structure prediction
    Current Opinion in Structural Biology, Vol. 18, No. 3. (June 2008), pp. 342-348.
    by Yang Zhang
    posted to structure review predictions by kgutwin on 2008-11-20 20:23:19 as ** along with 5 people chad_davis barry phoenixzxl marck zwang
  • Traffic prediction using FARIMA models
    Communications, 1999. ICC '99. 1999 IEEE International Conference on, Vol. 2 (1999), pp. 891-895 vol.2.
    by Yantai Shu, Zhigang Jin, Lianfang Zhang, Lei Wang, OWW Yang
    posted to predictions swingprediction traffic by kashivishwanath on 2007-06-22 19:50:21 as ** along with 1 group sysnet
  • How unlikely is a doomsday catastrophe?
    (21 Dec 2005)
    by Max Tegmark, Nick Bostrom
    posted to predictions catastrophe by jtmn on 2008-10-19 17:55:18 as ** along with 2 people vescalant quianominorleo
  • Ranked prediction of p53 targets using hidden variable dynamic modeling
    Genome Biology, Vol. 7, No. 3. (2006)
    by Martino Barenco, Daniela Tomescu, Daniel Brewer, Robin Callard, Jaroslav Stark, Michael Hubank
    posted to binding p53 predictions sites by johncumbers on 2007-05-13 18:22:02 as **
  • Quantifying the Relationships among Drug Classes
    J. Chem. Inf. Model., Vol. 48, No. 4. (13 March 2008), pp. 755-765.
    by Jérôme Hert, Michael J Keiser, John J Irwin, Tudor I Oprea, Brian K Shoichet
    posted to predictions sea by jerome_ucsf_slb on 2008-07-15 18:16:18 as ** along with 3 people and 1 group middledomain sobolevnrm ucbcjbm baker-group
  • Relating protein pharmacology by ligand chemistry
    Nature Biotechnology, Vol. 25, No. 2. (07 February 2007), pp. 197-206.
    by Michael J Keiser, Bryan L Roth, Blaine N Armbruster, Paul Ernsberger, John J Irwin, Brian K Shoichet
    posted to predictions sea by jerome_ucsf_slb on 2008-07-15 18:15:54 as ** along with 7 people ucbcjbm Yanno tjimenez kuhn daevans massivemayhem dgront
  • Automated generation of heuristics for biological sequence comparison
    BMC Bioinformatics, Vol. 6, No. 1. (2005)
    by Guy Slater, Ewan Birney
    posted to gene predictions by indigoviolet on 2007-07-15 14:09:07 as ** along with 7 people and 1 group jmcq druvus waszak massivemayhem wenhan hpaces marti EisenLab
  • Reference based annotation with GeneMapper.
    Genome Biol, Vol. 7, No. 4. (5 April 2006)
    by Sourav Chatterji, Lior Pachter
    posted to gene predictions by indigoviolet on 2007-07-15 14:10:23 as ** along with 4 people and 2 groups dpollard penka wenhan skumagai EisenLab Nie
  • The magic of RFID
    Queue, Vol. 2, No. 7. (October 2004), pp. 40-48.
    by Roy Want
    posted to predictions rfid by hugomallinson on 2008-01-15 00:42:36 as ** along with 3 people urvoy kae99 jschwier
  • Emerging Markets for RFID Traces
    (5 Jun 2006)
    by Matthias Bauer, Benjamin Fabian, Matthias Fischmann, Seda Gürses
    posted to predictions rfid future trace by hugomallinson on 2008-01-15 00:39:42 as ** along with 2 people and 1 group trunov cyph3r kickOffTUG-Robocup
  • Challenges to global RFID adoption
    Technovation, Vol. 26, No. 12. (December 2006), pp. 1317-1323.
    by NC Wu, MA Nystrom, TR Lin, HC Yu
    posted to rfid predictions press state_of_the_art by hugomallinson on 2008-01-15 00:36:19 as ** along with 3 people and 2 groups rap70 kleintoma jago Holonic_Tracilog_Team RFID deployment
  • WWW: past, present, and future
    Computer, Vol. 29, No. 10. (1996), pp. 69-77.
    by T Berners-Lee
    posted to history predictions semweb www by hamish on 2006-03-11 12:55:37 as ***
  • Statistical evaluation of local alignment features predicting allergenicity using supervised classification algorithms.
    Int Arch Allergy Immunol, Vol. 133, No. 2. (February 2004), pp. 101-112.
    by D Soeria-Atmadja, A Zorzet, MG Gustafsson, U Hammerling
    posted to predictions by Haggan on 2006-09-19 08:26:56 as **
  • GeneWise and Genomewise
    Genome Res., Vol. 14, No. 5. (1 May 2004), pp. 988-995.
    by Ewan Birney, Michele Clamp, Richard Durbin
    posted to predictions prediction genome gene computational comparative 12flies by indigoviolet to the group EisenLab on 2005-11-15 00:32:52 as *** along with 5 people and 1 group druvus azazello alexl wenhan Stew MBLAB
  • Reflexive Epistemology and Social Complexity: The Philosophical Legacy of Otto Neurath
    Philosophy of the Social Sciences, Vol. 20, No. 2. (1 June 1990), pp. 149-169.
    by Danilo Zolo
    posted to epistemology predictions sciences social by arielchezucite to the group Oracles - Futurology - Predictive Ideas on 2008-07-02 09:52:05 as ** along with 1 group international ethics
  • Electronic structure of graphene tubules based on C_60
    Physical Review B, Vol. 46, No. 3. (15 July 1992), 1804.
    by Riichiro Saito, Mitsutaka Fujita, G Dresselhaus, MS Dresselhaus
    posted to theoretical properties predictions nanotubes electronic early by andrewwall to the group Mauro on 2007-05-24 17:39:18 as ***** along with 1 person kirwandf
  • WebScipio: An online tool for the determination of gene structures using protein sequences.
    BMC Genomics, Vol. 9 (18 September 2008), 422.
    by Florian Odronitz, Holger Pillmann, Oliver Keller, Stephan Waack, Martin Kollmar
    posted to software proteome predictions gene by druvus on 2008-11-04 11:32:09 as ** along with 1 person natstreet
  • Prediction of membrane-protein topology from first principles
    Proceedings of the National Academy of Sciences, Vol. 105, No. 20. (20 May 2008), pp. 7177-7181.
    by Andreas Bernsel, Hakan Viklund, Jenny Falk, Erik Lindahl, Gunnar von Heijne, Arne Elofsson
    posted to software predictions motif membrane by druvus on 2008-10-29 13:58:44 as ** along with 2 people and 1 group superpyrin sobolevnrm baker-group
  • Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species
    BMC Bioinformatics, Vol. 9 (13 June 2008), 278.
    by Oliver Keller, Florian Odronitz, Mario Stanke, Martin Kollmar, Stephan Waack
    posted to software predictions ortholog gene by druvus on 2008-11-04 11:31:28 as ** along with 4 people natstreet guhjy GustavoLacerda tharris
  • A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection
    Genome Res., Vol. 17, No. 5. (1 May 2007), pp. 632-640.
    by Kousuke Hanada, Xu Zhang, Justin O Borevitz, Wen-Hsiung Li, Shin-Han Shiu
    posted to predictions model gene arabidopsis by druvus on 2008-11-03 15:46:47 as ** along with 3 people and 1 group natstreet djkt cursonivel1 cursonivel1
  • SEAN: SNP prediction and display program utilizing EST sequence clusters
    Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 495-496.
    by Derek Huntley, Angela Baldo, Saurabh Johri, Marek Sergot
    posted to snp predictions est by druvus on 2008-11-04 12:22:00 as ** along with 2 people guhjy Ayest
  • The Rough Guide to In Silico Function Prediction, or How To Use Sequence and Structure Information To Predict Protein Function
    PLoS Comput Biol, Vol. 4, No. 10. (31 October 2008), e1000160.
    by Marco Punta, Yanay Ofran
    posted to review proteome predictions by druvus on 2008-11-03 08:05:49 as ** along with 14 people and 1 group Zalanszabo bpcusack Katje joseph_x_zhou taguchi sjcockell markchen ptrobajo chad_davis mdstobbe giovenko nilanjanroy reyez GeeSharpMinor microbiology_nijmegen
  • IntaRNA: Efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions
    Bioinformatics (21 October 2008), btn544.
    by Anke Busch, Andreas S Richter, Rolf Backofen
    posted to srna software predictions bacteria by druvus on 2008-12-04 16:31:54 as **
  • The proactive brain: using analogies and associations to generate predictions
    Trends in Cognitive Sciences, Vol. 11, No. 7. (July 2007), pp. 280-289.
    by Moshe Bar
    posted to associations predictions by daviddch on 2007-07-25 19:49:50 as read along with 2 people mkharito oori
  • Accuracy of general practitioner's prognosis of the 1-year course of depression and generalised anxiety.
    The British journal of psychiatry : the journal of mental science, Vol. 178, No. 1. (January 2001), pp. 18-22.
    by RH Brink, J Ormel, BG Tiemens, TW Os, A Smit, JA Jenner, KV Meer
    posted to illness predictions by billga on 2008-04-06 22:34:58 as **
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