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Tag ppi_network [22 articles]

Recent papers classified by the tag ppi_network.
  • Information flow in interaction networks.
    J Comput Biol, Vol. 14, No. 8. (October 2007), pp. 1115-1143.
    by A Stojmirović, YK Yu
    posted to ppi_network by tmmurali on 2007-11-08 19:10:27 as ***** along with 1 person and 1 group guhjy csb_journal_club_public
  • Large-scale screening for novel low-affinity extracellular protein interactions
    Genome Res. (22 February 2008), gr.7187808.
    by Mark K Bushell, Christian Sollner, Benjamin Schuster-Boeckler, Alex Bateman, Gavin J Wright
    posted to ppi_network by tmmurali on 2008-04-01 19:30:00 as ** along with 9 people neils Dualsystems grahamc zwang guhjy carlk niallhaslam kluck paolomarcatili
  • A protein interaction network of the malaria parasite Plasmodium falciparum
    Nature, Vol. 438, No. 7064. (3 November 2005), pp. 103-107.
    by Douglas J Lacount, Marissa Vignali, Rakesh Chettier, Amit Phansalkar, Russell Bell, Jay R Hesselberth, Lori W Schoenfeld, Irene Ota, Sudhir Sahasrabudhe, Cornelia Kurschner, Stanley Fields, Robert E Hughes
    posted to functional_linkage_network ppi_network by tmmurali on 2005-11-02 22:52:04 as ***** along with 8 people and 2 groups ana dyermd Sharpshoot becarmson grahamc GeeSharpMinor lpfernandes csanford structural_bioinformatics Bioinformatics
  • Estimating the size of the human interactome
    Proceedings of the National Academy of Sciences (12 May 2008), 0708078105.
    by Michael P Stumpf, Thomas Thorne, Eric de Silva, Ronald Stewart, Hyeong J An, Michael Lappe, Carsten Wiuf
    posted to ppi_network by tmmurali on 2008-05-13 18:25:50 as ***** along with 20 people and 1 group tharris zwang chrissp100 sanchezbuelna guhjy phoenixzxl neils paolomarcatili mjoach xingxu Ema cabbagesofdoom balicea marck friendpine brianb roys Evangelia dragonrez bpcusack C. elegans / WormBase
  • Protein networks in disease
    Genome Res., Vol. 18, No. 4. (1 April 2008), pp. 644-652.
    by Trey Ideker, Roded Sharan
    posted to ppi_network by tmmurali on 2008-04-01 19:32:16 as ***** along with 21 people kaarsinogen giovenko guhjy balicea Borelli jwdietrich frohike bootsy nedwards roys mclarenv phoenixzxl brianb schuylrp jfr paolomarcatili gracio thomaskelder ptrobajo raiyar zwang
  • Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome.
    Genome Biol, Vol. 6, No. 5. (2005)
    by AK Ramani, RC Bunescu, RJ Mooney, EM Marcotte
    posted to ppi_network by tmmurali on 2005-06-08 19:01:42 as *** along with 18 people and 4 groups ggallone yaredo setar dragonrez okarsligil lfriedl ccots balajis maryee brant opheliav davidandrzej wnpx rlhsiao bundschu mikaelhuss raiyar grahamc Jarman Lab kdl Bioinformatics generif_paper
  • A map of human protein interactions derived from co-expression of human mRNAs and their orthologs
    Mol Syst Biol, Vol. 4 (15 April 2008)
    by Arun K Ramani, Zhihua Li, Traver G Hart, Mark W Carlson, Daniel R Boutz, Edward M Marcotte
    posted to dataset_interactions ppi_network ppi-prediction by tmmurali on 2008-04-16 21:21:37 as ** along with 11 people and 1 group kgutwin windman83 druvus jeremymiller biomcgary phoenixzxl zwang giovanni grahamc ardalby ptrobajo OPIG
  • Protein-protein interaction networks and biology—what's the connection?
    Nature Biotechnology, Vol. 26, No. 1., pp. 69-72.
    by Luke Hakes, John W Pinney, David L Robertson, Simon C Lovell
    posted to ppi_network ppi_network_quality by tmmurali on 2008-01-09 18:34:19 as ***** along with 15 people and 1 group Yanno guhjy jfr balicea dullhunk neils mikaelhuss cjeans nedwards biehl shikin mclarenv Yumyai paolomarcatili zdai GeneGo
  • The Plasmodium protein network diverges from those of other eukaryotes
    Nature, Vol. 438, No. 7064. (3 November 2005), pp. 108-112.
    by Silpa Suthram, Taylor Sittler, Trey Ideker
    posted to functional_linkage_network ppi_network gene-function-prediction by tmmurali on 2005-11-02 22:55:22 as ***** along with 4 people and 1 group dragonrez okarsligil rjarekm gurkanbebek Bioinformatics
  • An in Vivo Map of the Yeast Protein Interactome
    Science (8 May 2008), 1153878.
    by Kirill Tarassov, Vincent Messier, Christian R Landry, Stevo Radinovic, Mercedes M Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W Michnick
    posted to dataset-ppi ppi_network by tmmurali on 2008-06-13 22:10:04 as ** along with 7 people phoenixzxl cabbagesofdoom guhjy neils aubinhon brianb grahamc
  • Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction
    (18 July 2008)
    posted to comprehensive phd ppi_network by ethkim on 2008-06-29 04:24:54 as **
  • The Complexity of Enumeration and Reliability Problems
    SIAM Journal on Computing, Vol. 8, No. 3. (1979), pp. 410-421.
    by Leslie G Valiant
    posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:42:10 as **
  • The Complexity of Counting Cuts and of Computing the Probability that a Graph is Connected
    SIAM Journal on Computing, Vol. 12, No. 4. (1983), pp. 777-788.
    by Scott J Provan, Michael O Ball
    posted to comprehensive phd ppi_network by ethkim on 2008-06-25 20:46:09 as **
  • Increasing confidence of protein interactomes using network topological metrics.
    Bioinformatics, Vol. 22, No. 16. (15 August 2006), pp. 1998-2004.
    by J Chen, W Hsu, ML Lee, SK Ng
    posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:34:47 as ** along with 1 person bluto
  • Implementing a fully polynomial time approximation scheme for all terminal network reliability
    (1997), pp. 334-343.
    by David R Karger, Ray P Tai
    posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 21:02:27 as ** along with 1 person dominik
  • A Topological Measurement for Weighted Protein Interaction Network
    (2005), pp. 268-278.
    by Pengjun Pei, Aidong Zhang
    posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:38:35 as ** along with 1 person iris_2001
  • Construction of reliable protein-protein interaction networks with a new interaction generality measure.
    Bioinformatics, Vol. 19, No. 6. (12 April 2003), pp. 756-763.
    by R Saito, H Suzuki, Y Hayashizaki
    posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:36:50 as ** along with 2 people bluto cerca
  • Approximation Algorithms
    (22 March 2004)
    by Vijay V Vazirani
    posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 21:39:14 as ** along with 3 people citeUlike123 NeilInCanadia rocarvaj
  • A Randomized Fully Polynomial Time Approximation Scheme for the All-Terminal Network Reliability Problem
    SIAM Review, Vol. 43, No. 3. (2001), pp. 499-522.
    by David R Karger
    posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 21:01:02 as **
  • Systematic Assessment of High-Throughput Experimental Data for Reliable Protein Interactions Using Network Topology
    (2004), pp. 368-372.
    by Jin Chen, Wynne Hsu, Mong L Lee, See-Kiong Ng
    posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:32:41 as **
  • Conservation and coevolution in the scale-free human gene coexpression network.
    Mol Biol Evol, Vol. 21, No. 11. (November 2004), pp. 2058-2070.
    by IK Jordan, L Mariño-Ramírez, YI Wolf, EV Koonin
    posted to evolution_rate ppi_network by dragonrez on 2008-01-26 00:40:42 as ** along with 2 people bjorns Garamonfok
  • Cross-Species Cluster Co-Conservation: A new method for generating protein interaction networks
    Genome Biology, Vol. 8 (05 September 2007), R185.
    by Anis Karimpour-Fard, Corrella S Detweiler, Kimberly D Erickson, Lawrence Hunter, Ryan T Gill
    posted to cross-species interaction_prediction ppi_network by dragonrez on 2007-10-12 23:10:14 as **
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