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Tag populationgenetics [30 articles]

Recent papers classified by the tag populationgenetics.
  • DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics
    Trends in Genetics, Vol. 23, No. 4. (April 2007), pp. 167-172.
    by Mehrdad Hajibabaei, Gregory A Singer, Paul D Hebert, Donal A Hickey
    posted to biodiversity dnabarcoding populationgenetics taxonomy by kwinset on 2008-03-13 00:31:42 as *** along with 1 person TaqSys
  • Relative influences of historical and contemporary forces shaping the distribution of genetic variation in the Atlantic killifish, Fundulus heteroclitus
    Molecular Ecology, Vol. 17, No. 5. (March 2008), pp. 1344-1360.
    by David D Duvernell, James B Lindmeier, Katherine E Faust, Andrew Whitehead
    posted to morphology populationgenetics statistics by kwinset on 2008-03-14 02:16:43 as **
  • Japanese Population Structure, Based on SNP Genotypes from 7003 Individuals Compared to Other Ethnic Groups: Effects on Population-Based Association Studies.
    American journal of human genetics (23 September 2008)
    by Yumi Yamaguchi-Kabata, Kazuyuki Nakazono, Atsushi Takahashi, Susumu Saito, Naoya Hosono, Michiaki Kubo, Yusuke Nakamura, Naoyuki Kamatani
    posted to populationgenetics japan by jdbowes on 2008-09-27 12:39:01 as ****
  • Complex genetics of amyotrophic lateral sclerosis.
    Am J Hum Genet, Vol. 75, No. 6. (December 2004), pp. 933-947.
    by CB Kunst
    posted to als genetics populationgenetics by inbetweener on 2005-08-08 18:05:33 as ** along with 1 person preeder
  • Genetic variation in the human androgen receptor gene is the major determinant of common early-onset androgenetic alopecia.
    Am J Hum Genet, Vol. 77, No. 1. (July 2005), pp. 140-148.
    by AM Hillmer, S Hanneken, S Ritzmann, T Becker, J Freudenberg, FF Brockschmidt, A Flaquer, Y Freudenberg-Hua, RA Jamra, C Metzen, U Heyn, N Schweiger, RC Betz, B Blaumeiser, J Hampe, S Schreiber, TG Schulze, HC Hennies, J Schumacher, P Propping, T Ruzicka, S Cichon, TF Wienker, R Kruse, MM Nothen
    posted to alopecia ar populationgenetics by inbetweener on 2005-08-08 17:12:49 as *** along with 1 person pcahan1
  • Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data.
    Genetics, Vol. 161, No. 3. (July 2002), pp. 1307-1320.
    by AJ Drummond, GK Nicholls, AG Rodrigo, W Solomon
    posted to coalescent evolution mcmc nsfprop phylogenetics populationgenetics by AaronDarling on 2006-04-06 20:53:35 as ** along with 2 people and 1 group alexeid kaspermunch Bioinformatics
  • Selection intensity for codon bias and the effective population size of Escherichia coli.
    Genetics, Vol. 142, No. 4. (April 1996), pp. 1379-1382.
    by OG Berg
    posted to evolution microbialevolution populationgenetics by AaronDarling on 2006-07-11 08:42:33 as **
  • Gene tree distributions under the coalescent process.
    Evolution Int J Org Evolution, Vol. 59, No. 1. (January 2005), pp. 24-37.
    by JH Degnan, LA Salter
    posted to coalescent nsfprop populationgenetics by AaronDarling on 2006-04-06 21:08:31 as ** along with 1 person balicea
  • The population genetics of ecological specialization in evolving Escherichia coli populations
    Nature, Vol. 407, No. 6805. (12 October 2000), pp. 736-739.
    by Vaughn S Cooper, Richard E Lenski
    posted to nsfprop populationgenetics by AaronDarling on 2006-04-01 02:56:18 as **
  • Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis.
    Genetics, Vol. 167, No. 2. (June 2004), pp. 747-760.
    by J Hey, R Nielsen
    posted to evolution genomeevolution nsfprop populationgenetics speciestree by AaronDarling on 2006-04-06 20:27:55 as ** along with 1 person and 1 group kaspermunch Bioinformatics
  • Recombination and the population structures of bacterial pathogens.
    Annu Rev Microbiol, Vol. 55 (2001), pp. 561-590.
    by EJ Feil, BG Spratt
    posted to populationgenetics recombination by AaronDarling on 2006-07-04 00:13:18 as ** along with 4 people druvus treangen jmeppley CharlesM
  • Estimating ancestral population sizes and divergence times.
    Genetics, Vol. 163, No. 1. (January 2003), pp. 395-404.
    by JD Wall
    posted to evolution nsfprop populationgenetics speciation speciestree by AaronDarling on 2006-04-06 20:25:59 as **
  • Estimating diversifying selection and functional constraint in the presence of recombination.
    Genetics, Vol. 172, No. 3. (March 2006), pp. 1411-1425.
    by DJ Wilson, G McVean
    posted to evolution nsfprop populationgenetics recombination by AaronDarling on 2006-04-06 20:43:50 as **** along with 1 person Natasha
  • Relaxed Phylogenetics and Dating with Confidence
    PLoS Biology, Vol. 4, No. 5. (1 May 2006)
    by Alexei J Drummond, Simon Y Ho, Matthew J Phillips, Andrew Rambaut
    posted to evolution mcmc phylogenetics populationgenetics recombination by AaronDarling on 2006-07-04 01:31:08 as ** along with 3 people alexeid brixtonmc redelings
  • Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome.
    Science (27 September 2007)
    by Jan O O Korbel, Alexander Eckehart E Urban, Jason P P Affourtit, Brian Godwin, Fabian Grubert, Jan Fredrik F Simons, Philip M M Kim, Dean Palejev, Nicholas J J Carriero, Lei Du, Bruce E E Taillon, Zhoutao Chen, Andrea Tanzer, A C Eugenia C Saunders, Jianxiang Chi, Fengtang Yang, Nigel P P Carter, Matthew E E Hurles, Sherman M M Weissman, Timothy T T Harkins, Mark B B Gerstein, Michael Egholm, Michael Snyder
    posted to genomeevolution populationgenetics by AaronDarling on 2007-10-15 02:31:44 as ** along with 12 people and 1 group orzenil stuetz matthewsuderman dpollard dchughes rdiaz giovanni jlangdon annacarina07 Neeperando jfr caseybrown EisenLab
  • The probability of topological concordance of gene trees and species trees.
    Theor Popul Biol, Vol. 61, No. 2. (March 2002), pp. 225-247.
    by NA Rosenberg
    posted to nsfprop populationgenetics speciation speciestree by AaronDarling on 2006-04-01 03:00:27 as ** along with 1 person alexeid
  • Fast "coalescent" simulation.
    BMC Genet, Vol. 7, No. 1. (15 March 2006)
    by Paul Marjoram, Jeff D Wall
    posted to genomeevolution nsfprop populationgenetics recombination by AaronDarling on 2006-04-06 20:24:50 as ** along with 2 people and 1 group renewang lh3 Durbin group
  • Recombination and population structure in Escherichia coli.
    Genetics, Vol. 146, No. 3. (July 1997), pp. 745-750.
    by R Milkman
    posted to evolution nsfprop populationgenetics recombination by AaronDarling on 2006-04-10 18:44:37 as **
  • Maximum likelihood estimation of recombination rates from population data.
    Genetics, Vol. 156, No. 3. (November 2000), pp. 1393-1401.
    by MK Kuhner, J Yamato, J Felsenstein
    posted to nsfprop populationgenetics recombination by AaronDarling on 2006-04-06 20:47:31 as **
  • Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach
    PNAS, Vol. 98, No. 8. (10 April 2001), pp. 4563-4568.
    by Peter Beerli, Joseph Felsenstein
    posted to evolution nsfprop populationgenetics by AaronDarling on 2006-04-06 20:50:28 as ** along with 2 people and 1 group balicea spavey FAB-lab
  • A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination.
    Genome Res (7 November 2006)
    by Xavier Didelot, Mark Achtman, Julian Parkhill, Nicholas R R Thomson, Daniel Falush
    posted to geneconversion microbialevolution phylogenetics populationgenetics by AaronDarling on 2008-02-28 09:00:06 as ** along with 5 people druvus aswin aiolozil pnicolas Xavier
  • Mathematical modeling of evolution of horizontally transferred genes.
    Mol Biol Evol, Vol. 22, No. 8. (August 2005), pp. 1721-1732.
    by AS Novozhilov, GP Karev, EV Koonin
    posted to genomeevolution horizontaltransfer microbialevolution nsfprop populationgenetics by AaronDarling on 2006-04-10 18:32:59 as read
  • A coalescent-based method for detecting and estimating recombination from gene sequences.
    Genetics, Vol. 160, No. 3. (March 2002), pp. 1231-1241.
    by G McVean, P Awadalla, P Fearnhead
    posted to genomeevolution nsfprop populationgenetics recombination by AaronDarling on 2006-04-06 20:45:51 as ** along with 1 person jmeppley
  • Polymorphic micro-inversions contribute to the genomic variability of humans and chimpanzees.
    Hum Genet, Vol. 119, No. 1-2. (March 2006), pp. 103-112.
    by JM Szamalek, DN Cooper, W Schempp, P Minich, M Kohn, J Hoegel, V Goidts, H Hameister, H Kehrer-Sawatzki
    posted to genomerearrangement populationgenetics by AaronDarling on 2007-03-04 07:40:15 as **
  • Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci.
    Genetics, Vol. 164, No. 4. (August 2003), pp. 1645-1656.
    by B Rannala, Z Yang
    posted to evolution nsfprop populationgenetics speciation speciestree by AaronDarling on 2006-04-06 20:23:03 as ** along with 1 person alexeid
  • Inference of demographic history from genealogical trees using reversible jump Markov chain Monte Carlo.
    BMC Evol Biol, Vol. 5, No. 1. (21 January 2005)
    by R Opgen-Rhein, L Fahrmeir, K Strimmer
    posted to coalescent evolution mcmc populationgenetics by AaronDarling on 2006-04-10 18:36:48 as **
  • Inferring Phylogeny Despite Incomplete Lineage Sorting
    Systematic Biology, Vol. 55, No. 1. (February 2006), pp. 21-30.
    by Wayne Maddison, L Knowles
    posted to evolution genomeevolution microbialevolution nsfprop populationgenetics recombination speciation speciestree by AaronDarling on 2006-04-06 20:14:02 as read along with 1 person beerli
  • LAMARC 2.0: maximum likelihood and Bayesian estimation of population parameters.
    Bioinformatics, Vol. 22, No. 6. (15 March 2006), pp. 768-770.
    by MK Kuhner
    posted to evolution nsfprop phylogenetics populationgenetics recombination by AaronDarling on 2006-04-06 20:48:52 as **
  • Bayesian coalescent inference of past population dynamics from molecular sequences.
    Mol Biol Evol, Vol. 22, No. 5. (May 2005), pp. 1185-1192.
    by AJ Drummond, A Rambaut, B Shapiro, OG Pybus
    posted to coalescent evolution populationgenetics by AaronDarling on 2006-04-10 18:36:01 as read
  • The concordance of gene trees and species trees at two linked Loci.
    Genetics, Vol. 172, No. 3. (March 2006), pp. 1979-1984.
    by M Slatkin, JL Pollack
    posted to nsfprop populationgenetics recombination speciation speciestree by AaronDarling on 2006-04-01 02:59:29 as **
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