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Tag population_genomics [15 articles]

Recent papers classified by the tag population_genomics.
  • Locus- and Population-Specific Selection and Differentiation between Incipient Species of Anopheles gambiae
    Mol Biol Evol, Vol. 24, No. 9. (1 September 2007), pp. 2132-2138.
    by Thomas L Turner, Matthew W Hahn
    posted to anopheles mosquito population_genomics speciation by stajich on 2007-10-03 22:32:26 as **
  • GENOMEPOP: A program to simulate genomes in populations
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Antonio C Rodriguez
    posted to bioinformatics methods population_genomics simulation by stajich on 2008-04-30 19:51:50 as ** along with 3 people and 1 group druvus tonia_schwartz guhjy Berkeley Mycology
  • Rampant Adaptive Evolution in Regions of Proteins with Unknown Function in Drosophila simulans.
    PLoS ONE, Vol. 2, No. 10. (2007)
    by AK Holloway, DJ Begun
    posted to adaptive drosophila evolution genomics population_genomics by stajich on 2007-11-06 17:46:17 as *** along with 1 person and 1 group pradiptaray EisenLab
  • Population genomics of the wild yeast Saccharomyces paradoxus: Quantifying the life cycle
    Proceedings of the National Academy of Sciences (14 March 2008), 0707314105.
    by Isheng J Tsai, Douda Bensasson, Austin Burt, Vassiliki Koufopanou
    posted to population_genomics saccharomyces by stajich on 2008-05-24 19:43:28 as ** along with 2 people and 1 group jasontsai bpcusack Berkeley Mycology
  • Genomic insights into positive selection
    Trends in Genetics, Vol. 22, No. 8. (August 2006), pp. 437-446.
    by Shameek Biswas, Joshua M Akey
    posted to positive_selection population_genomics population_genetics by stajich on 2007-02-11 23:50:02 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • The infinite sites model of genome evolution
    Proceedings of the National Academy of Sciences, Vol. 105, No. 38. (2008), pp. 14254-14261.
    by Jian Ma, Aakrosh Ratan, Brian J Raney, Bernard B Suh, Webb Miller, David Haussler
    posted to population_genomics molecular_evolution genomics genome_evolution computational_biology bioinformatics by stajich on 2008-09-24 19:53:28 as ** along with 4 people and 1 group druvus operon inesdesantiago stringertheory Berkeley Mycology
  • Identifying selected regions from heterozygosity and divergence using a light-coverage genomic dataset from two human populations.
    PLoS ONE, Vol. 3, No. 3. (2008)
    by TK Oleksyk, K Zhao, FM De La Vega, DA Gilbert, SJ O'Brien, MW Smith
    posted to human population_genomics by stajich on 2008-04-23 20:13:04 as ** along with 1 group Berkeley Mycology
  • The McDonald-Kreitman Test and Slightly Deleterious Mutations
    Mol Biol Evol, Vol. 25, No. 6. (1 June 2008), pp. 1007-1015.
    by Jane Charlesworth, Adam Eyre-Walker
    posted to adaptation methods molecular_evolution population_genetics population_genomics by stajich on 2008-05-10 01:44:49 as ** along with 6 people and 1 group emptyhb cabbagesofdoom gjuggler Stew stevanspringer bpcusack Berkeley Mycology
  • Genome-Wide Analysis of Nucleotide-Level Variation in Commonly Used Saccharomyces cerevisiae Strains.
    PLoS ONE, Vol. 2 (2007)
    by J Schacherer, DM Ruderfer, D Gresham, K Dolinski, D Botstein, L Kruglyak
    posted to population_genomics saccharomyces yeast by stajich on 2007-04-04 02:06:36 as ** along with 2 people and 1 group michaelbarton dmc Durbin group
  • Population Genetic Inference from Resequencing Data
    Genetics (3 November 2008), genetics.107.080630.
    by Rong Jiang, Simon Tavare, Paul Marjoram
    posted to population_genomics population_genetics by stajich on 2008-11-04 05:50:48 as ** along with 4 people and 2 groups natstreet djkt abizar druvus iSEEM Berkeley Mycology
  • Modified Hudson-Kreitman-Aguade test and two-dimensional evaluation of neutrality tests.
    Genetics, Vol. 173, No. 3. (July 2006), pp. 1725-1733.
    by H Innan
    posted to population_genetics population_genomics by stajich on 2007-10-04 16:15:00 as ** along with 2 people bpb pradiptaray
  • High-Resolution Mapping of Crossovers Reveals Extensive Variation in Fine-Scale Recombination Patterns Among Humans
    Science (31 January 2008), 1151851.
    by Graham Coop, Xiaoquan Wen, Carole Ober, Jonathan K Pritchard, Molly Przeworski
    posted to human mapping population_genomics recombination variation by stajich on 2008-04-10 21:46:02 as ** along with 3 people and 1 group djkt lisa1 biomcgary Berkeley Mycology
  • The Joint Allele-Frequency Spectrum in Closely Related Species
    Genetics, Vol. 177, No. 1. (1 September 2007), pp. 387-398.
    by Hua Chen, Richard E Green, Svante Paabo, Montgomery Slatkin
    posted to divergence_time human population_genetics population_genomics by stajich on 2008-04-10 21:47:17 as ** along with 3 people and 1 group ryanraaum RichardDurbin ilowery Berkeley Mycology
  • PLINK: a tool set for whole-genome association and population-based linkage analyses.
    American journal of human genetics, Vol. 81, No. 3. (September 2007), pp. 559-575.
    by S Purcell, B Neale, K Todd-Brown, L Thomas, MA Ferreira, D Bender, J Maller, P Sklar, PI de Bakker, MJ Daly, PC Sham
    posted to wga software population_genomics methods linkage bioinformatics by stajich on 2008-09-19 19:17:54 as ** along with 5 people and 3 groups daforerog vplagnol misonneh Zephyrus psique Roswell Cancer Crosstalk Berkeley Mycology parkinson's disease references
  • Common Sequence Polymorphisms Shaping Genetic Diversity in Arabidopsis thaliana
    Science, Vol. 317, No. 5836. (20 July 2007), pp. 338-342.
    by Richard M Clark, Gabriele Schweikert, Christopher Toomajian, Stephan Ossowski, Georg Zeller, Paul Shinn, Norman Warthmann, Tina T Hu, Glenn Fu, David A Hinds, Huaming Chen, Kelly A Frazer, Daniel H Huson, Bernhard Scholkopf, Magnus Nordborg, Gunnar Ratsch, Joseph R Ecker, Detlef Weigel
    posted to population_genomics variation by dandaman on 2008-07-01 13:20:37 as ** along with 5 people and 1 group maren GeeSharpMinor xwbcn sstoma braingrind VirtualPlants
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