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Tag plants [241 articles]

Recent papers classified by the tag plants.
  • Visual models of plants interacting with their environment
    (1996), pp. 397-410.
    by R Mech, P Prusinkiewicz
    posted to plants plant-simulation l-systems growth by zzkt on 2008-09-04 07:21:15 as *** along with 4 people and 1 group smithco gilgamec ddasilva witherj Plant-Tissue-Simulation
  • Genome-Wide Association Mapping in Arabidopsis Identifies Previously Known Flowering Time and Pathogen Resistance Genes.
    PLoS Genet, Vol. 1, No. 5. (11 November 2005)
    by María José J Aranzana, Sung Kim, Keyan Zhao, Erica Bakker, Matthew Horton, Katrin Jakob, Clare Lister, John Molitor, Chikako Shindo, Chunlao Tang, Christopher Toomajian, Brian Traw, Honggang Zheng, Joy Bergelson, Caroline Dean, Paul Marjoram, Magnus Nordborg
    posted to disequilibrium_linkage plants by xwbcn on 2005-11-30 12:57:04 as ***** along with 1 person jbsaltz
  • The effects of artificial selection on the maize genome.
    Science, Vol. 308, No. 5726. (27 May 2005), pp. 1310-1314.
    by SI Wright, IV Bi, SG Schroeder, M Yamasaki, JF Doebley, MD McMullen, BS Gaut
    posted to disequilibrium_linkage plants by xwbcn on 2005-11-29 14:48:06 as ***** along with 1 person timflutre
  • Single feature polymorphism discovery in rice.
    PLoS ONE, Vol. 2 (2007)
    by R Kumar, J Qiu, T Joshi, B Valliyodan, D Xu, HT Nguyen
    posted to chip genome plant plants rice sfp by xwbcn on 2007-03-22 06:48:35 as ***** along with 1 person natstreet
  • Prediction of plant microRNA targets.
    Cell, Vol. 110, No. 4. (23 August 2002), pp. 513-520.
    by MW Rhoades, BJ Reinhart, LP Lim, CB Burge, B Bartel, DP Bartel
    posted to arabidopsis comparative_study data_mining method mirna plants by xwbcn on 2007-07-01 17:13:13 as ** along with 1 person and 1 group cdawson GIG
  • Small RNAs as big players in plant abiotic stress responses and nutrient deprivation.
    Trends Plant Sci, Vol. 12, No. 7. (July 2007), pp. 301-309.
    by R Sunkar, V Chinnusamy, J Zhu, JK Zhu
    posted to abiotic mirna nutrient plants stress by xwbcn on 2007-09-07 01:43:43 as **
  • Cross-species comparison of gene expression between human and porcine tissue, using single microarray platform--preliminary results.
    Clinical transplantation, Vol. 18 Suppl 12 (2004), pp. 76-80.
    by G Shah, M Azizian, D Bruch, R Mehta, D Kittur
    posted to arabidopsis microarray plants by xwbcn on 2008-08-22 10:07:26 as **
  • Modeling plant structures using concept sketches
    (2006), pp. 105-113.
    by Fabricio Anastacio, Mario C Sousa, Faramarz Samavati, Joaquim A Jorge
    posted to modeling plants sketching by witherj on 2006-10-20 14:09:50 as read
  • Image-based plant modeling
    ACM Trans. Graph., Vol. 25, No. 3. (July 2006), pp. 599-604.
    by Long Quan, Ping Tan, Gang Zeng, Lu Yuan, Jingdong Wang, Sing B Kang
    posted to modeling plants by witherj on 2006-10-20 14:07:28 as ** along with 2 people krissp heymiki
  • Seamless Integration of Initial Sketching and Subsequent Detail Editing in Flower Modeling
    Vol. 25 (2006), pp. 617-624.
    by T Ijiri, S Owada, T Igarashi
    posted to trees sketching plants modeling by witherj on 2008-09-12 12:56:44 as **
  • Recombination: an underappreciated factor in the evolution of plant genomes
    Nature Reviews Genetics, Vol. 8, No. 1. (8 January 2007), pp. 77-84.
    by Brandon S Gaut, Stephen I Wright, Carène Rizzon, Jan Dvorak, Lorinda K Anderson
    posted to plants recombination by urgi on 2007-11-28 16:39:42 as ** along with 3 people echinotrix timflutre dandaman
  • Competition and coexistence in plant communities
    Trends in Ecology and Evolution, Vol. 9, No. 7. (July 1994), pp. 246-250.
    by Jan Bengtsson, Torbjorn Fagerstrom, Hakan Rydin
    posted to competition plants resources articles by tomrevilla on 2008-03-27 11:02:21 as *** along with 1 group Ecology
  • Widespread Translational Inhibition by Plant miRNAs and siRNAs
    Science (15 May 2008), 1159151.
    by Peter Brodersen, Lali Sakvarelidze-Achard, Marianne Bruun-Rasmussen, Patrice Dunoyer, Yoshiharu Y Yamamoto, Leslie Sieburth, Olivier Voinnet
    posted to mirna plants by tolot27 on 2008-07-30 11:54:22 as ** along with 5 people and 1 group giovenko softsimu bootsy heliopais mariakmejia microRNA
  • The Epigenetic Landscape of Plants
    Science, Vol. 320, No. 5875. (25 April 2008), pp. 489-492.
    by Xiaoyu Zhang
    posted to epigenetics plants by timflutre on 2008-05-02 14:25:44 as ** along with 3 people and 1 group jiayi369 natstreet ArtemPankin Khavkin's lab
  • Mixing and matching: the essence of plant systemic silencing?
    Trends in genetics : TIG, Vol. 24, No. 4. (April 2008), pp. 151-154.
    by P Dunoyer, O Voinnet
    posted to silencing rna gene_expression plants epigenetics by timflutre on 2008-09-17 10:14:07 as read
  • Evolutionary history of the grasses.
    Plant Physiology, Vol. 125, No. 3. (March 2001), pp. 1198-1205.
    by EA Kellogg
    posted to evolution plants by timflutre on 2007-09-12 09:04:24 as **
  • Plant centromere organization: a dynamic structure with conserved functions.
    Trends Genet, Vol. 23, No. 3. (March 2007), pp. 134-139.
    by J Ma, RA Wing, JL Bennetzen, SA Jackson
    posted to plants epigenetics by timflutre on 2007-09-12 08:59:55 as **
  • Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events.
    Nature, Vol. 422, No. 6930. (27 March 2003), pp. 433-438.
    by JE Bowers, BA Chapman, J Rong, AH Paterson
    posted to plants phylogeny genomics duplications angiosperms by timflutre on 2008-09-22 17:21:35 as **
  • Plant domestication, a unique opportunity to identify the genetic basis of adaptation.
    Proc Natl Acad Sci U S A, Vol. 104 Suppl 1 (15 May 2007), pp. 8641-8648.
    by J Ross-Ibarra, PL Morrell, BS Gaut
    posted to domestication plants by timflutre on 2007-06-22 11:27:23 as ** along with 1 person dfs700
  • Genome-Scale Proteomics Reveals Arabidopsis thaliana Gene Models and Proteome Dynamics
    Science (24 April 2008), 1157956.
    by Katja Baerenfaller, Jonas Grossmann, Monica A Grobei, Roger Hull, Matthias Hirsch-Hoffmann, Shaul Yalovsky, Philip Zimmermann, Ueli Grossniklaus, Wilhelm Gruissem, Sacha Baginsky
    posted to thaliana arabidopsis genomics plants proteomics by timflutre on 2008-05-21 09:12:36 as *** along with 6 people druvus renatomilani xwbcn megraw caseybrown jmjimenez
  • Structure and evolution of cereal genomes.
    Current opinion in genetics & development, Vol. 13, No. 6. (December 2003), pp. 644-650.
    by AH Paterson, JE Bowers, DG Peterson, JC Estill, BA Chapman
    posted to plants genomics cereal by timflutre on 2008-09-22 16:09:11 as **
  • Genome Annotation in Plants and Fungi: EuGene as a Model Platform
    Current Bioinformatics, Vol. 3, No. 2. (May 2008), pp. 87-97.
    by Foissac, Sylvain, Gouzy, Jerome, Rombauts, Stephane, Mathe, Catherine, Amselem, Joelle, Sterck, Lieven, De Peer, V Yves, Rouze, Pierre, Schiex, Thomas
    posted to plants genomics bioinformatics annotation by timflutre on 2008-10-09 09:26:34 as ** along with 3 people and 1 group GustavoLacerda jamselem orzenil Centre de Recherches Interdisciplinaires
  • Grains of knowledge: genomics of model cereals.
    Genome research, Vol. 15, No. 12. (December 2005), pp. 1643-1650.
    by AH Paterson, M Freeling, T Sasaki
    posted to plants genomics cereal by timflutre on 2008-09-22 16:10:28 as **
  • Genome evolution in polyploids.
    Plant Molecular Biology, Vol. 42, No. 1. (January 2000), pp. 225-249.
    by JF Wendel
    posted to genomics plants by timflutre on 2007-09-17 09:07:01 as ** along with 2 people echinotrix dandaman
  • Selection on Major Components of Angiosperm Genomes
    Science, Vol. 320, No. 5875. (25 April 2008), pp. 484-486.
    by Brandon S Gaut, Jeffrey Ross-Ibarra
    posted to plants te by timflutre on 2008-05-02 14:05:49 as ** along with 4 people and 1 group biomcgary aprasad echinotrix ArtemPankin Khavkin's lab
  • Darwin's abominable mystery: Insights from a supertree of the angiosperms
    PNAS, Vol. 101, No. 7. (17 February 2004), pp. 1904-1909.
    by Jonathan T Davies, Timothy G Barraclough, Mark W Chase, Pamela S Soltis, Douglas E Soltis, Vincent Savolainen
    posted to evolution plants by timflutre on 2007-09-13 12:48:54 as ** along with 1 person and 1 group cmm FAB-lab
  • Crop evolution: from genetics to genomics.
    Current opinion in genetics & development, Vol. 17, No. 6. (December 2007), pp. 525-532.
    by JM Burke, JC Burger, MA Chapman
    posted to plants genomics genetics cereal by timflutre on 2008-09-22 16:17:28 as ** along with 1 person and 1 group ArtemPankin Khavkin's lab
  • Genome duplication and the origin of angiosperms
    Trends in Ecology & Evolution, Vol. 20, No. 11. (November 2005), pp. 591-597.
    by Stefanie De Bodt, Steven Maere, Yves Van de Peer
    posted to duplication plants by timflutre on 2007-08-29 10:00:48 as ** along with 3 people and 1 group cmm echinotrix plofje FAB-lab
  • Genomic Plasticity and the Diversity of Polyploid Plants
    Science, Vol. 320, No. 5875. (25 April 2008), pp. 481-483.
    by AR Leitch, IJ Leitch
    posted to plants polyploidy by timflutre on 2008-05-02 13:58:05 as ** along with 5 people and 1 group natstreet biomcgary imtechnology echinotrix ArtemPankin Khavkin's lab
  • The nature of plant species
    Nature, Vol. 440, No. 7083., pp. 524-527.
    by Loren H Rieseberg, Troy E Wood, Eric J Baack
    posted to ecology plants by timflutre on 2007-09-04 14:44:02 as ** along with 4 people and 1 group stevanspringer bayesian cmm josepe FAB-lab
  • Molecular Population Genetics and the Search for Adaptive Evolution in Plants
    Molecular Biology and Evolution, Vol. 22, No. 3. (March 2005), pp. 506-519.
    by Stephen I Wright, Brandon S Gaut
    posted to population genetics bioinformatics plants by timflutre on 2007-06-22 11:26:06 as ** along with 3 people and 1 group yawadee penka ArtemPankin Nie
  • Transposons and genome evolution in plants.
    PNAS, Vol. 97, No. 13. (20 June 2000), pp. 7002-7007.
    by Nina Fedoroff
    posted to genomics plants te by timflutre on 2007-01-11 14:25:23 as **
  • Molecular characterization of the major wheat domestication gene Q.
    Genetics, Vol. 172, No. 1. (January 2006), pp. 547-555.
    by KJ Simons, JP Fellers, HN Trick, Z Zhang, YS Tai, BS Gill, JD Faris
    posted to wheat plants genetics domestication by timflutre on 2008-10-13 14:57:46 as ** along with 1 person dfs700
  • The maize genome as a model for efficient sequence analysis of large plant genomes.
    Current opinion in plant biology, Vol. 9, No. 2. (April 2006), pp. 149-156.
    by PD Rabinowicz, JL Bennetzen
    posted to plants maize genomics by timflutre on 2008-09-22 16:15:41 as **
  • The large genome constraint hypothesis: evolution, ecology and phenotype.
    Annals of Botany, Vol. 95, No. 1. (January 2005), pp. 177-190.
    by CA Knight, NA Molinari, DA Petrov
    posted to genomics plants te by timflutre on 2006-12-23 08:54:44 as ** along with 4 people echinotrix TaqSys qwermish PetrovLab
  • notes Demography and weak selection drive patterns of transposable element diversity in natural populations of Arabidopsis lyrata.
    Proceedings of the National Academy of Sciences of the United States of America (4 September 2008)
    by Steven Lockton, Jeffrey Ross-Ibarra, Brandon S S Gaut
    posted to te plants demography arabidopsis by timflutre on 2008-09-10 22:02:47 as **
  • A survey of the molecular evolutionary dynamics of twenty-five multigene families from four grass taxa.
    Journal of Molecular Evolution, Vol. 52, No. 2. (February 2001), pp. 144-156.
    by L Zhang, SK Pond, BS Gaut
    posted to molecular evolution plants by timflutre on 2007-09-11 08:58:30 as ** along with 1 person druvus
  • Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution.
    Proc Natl Acad Sci U S A, Vol. 103, No. 47. (21 November 2006), pp. 17638-17643.
    by C Vitte, JL Bennetzen
    posted to genomics plants te by timflutre on 2007-09-03 16:04:34 as **
  • The distribution of genes in the genomes of Gramineae.
    Proc Natl Acad Sci U S A, Vol. 94, No. 13. (24 June 1997), pp. 6857-6861.
    by A Barakat, N Carels, G Bernardi
    posted to genomics plants by timflutre on 2007-09-17 09:04:52 as ** along with 1 person sdinka
  • Polyploidy and genome evolution in plants.
    Curr Opin Plant Biol, Vol. 8, No. 2. (April 2005), pp. 135-141.
    by KL Adams, JF Wendel
    posted to polyploidy plants genomics epigenetics by timflutre on 2008-10-14 10:57:39 as ** along with 2 people echinotrix BioNica
  • Epigenetics and its Implications for Plant Biology 2. The Epigenetic Epiphany: Epigenetics, Evolution and Beyond
    Annals of Botany, Vol. 97, No. 1. (January 2006), pp. 11-27.
    by RT Grant-Downton, HG Dickinson
    posted to epigenetics inheritance plants by thomasvangurp on 2008-05-23 21:58:53 as ***** along with 2 people braingrind bjuurlink
  • Consequences of intraspecific variation for the structure and function of ecological communities: Part 1. Model development and predicted patterns of diversity
    Ecological Modelling, Vol. 207, No. 2-4. (10 October 2007), pp. 264-276.
    by James L Bown, Elizaveta Pachepsky, Alistair Eberst, Ursula Bausenwein, Peter Millard, Geoff R Squire, John W Crawford
    posted to plants modelling by tg1w on 2008-10-24 08:34:50 as read
  • Interspecific fungal interactions in spatially heterogeneous systems
    FEMS Microbiology Ecology, Vol. 27, No. 1. (September 1998), pp. 21-32.
    by N White
    posted to plants by tg1w on 2008-11-19 10:13:55 as ***
  • notes Plant species richness and community productivity: why the mechanism that promotes coexistence matters
    Ecology Letters (January 2002), pp. 56-65.
    by Nicolas Mouquet, Joslin L Moore, Michel Loreau
    posted to plants modelling ecology by tg1w on 2008-11-19 20:41:38 as ***
  • Environmental variability and allocation trade-offs maintain species diversity in a process-based model of succulent plant communities
    Ecological Modelling, Vol. 199, No. 4. (16 December 2006), pp. 486-504.
    by B Reineking, M Veste, C Wissel, A Huth
    posted to plants model ecology by tg1w on 2008-11-29 20:30:54 as *
  • Local population dynamics of an invasive tree species with a complex life-history cycle: A stochastic matrix model
    Ecological Modelling, Vol. 201, No. 2. (24 February 2007), pp. 127-143.
    by E Sebertcuvillier, F Paccaut, O Chabrerie, P Endels, O Goubet, G Decocq
    posted to plants modelling by tg1w on 2008-10-29 16:36:26 as ***
  • An architectural model of spring wheat: Evaluation of the effects of population density and shading on model parameterization and performance
    Ecological Modelling, Vol. 200, No. 3-4. (24 January 2007), pp. 308-320.
    by J Evers, J Vos, C Fournier, B Andrieu, M Chelle, P Struik
    posted to plants modelling by tg1w on 2008-10-29 16:38:32 as **
  • notes Predicting changes in community composition and ecosystem functioning from plant traits: revisiting the Holy Grail
    Functional Ecology, Vol. 16, No. 5. (2002), pp. 545-556.
    by S Lavorel, E Garnier
    posted to plants modelling ecology by tg1w on 2008-11-29 20:32:27 as read
  • Mathematical and computational challenges in population biology and ecosystems science.
    Science, Vol. 275, No. 5298. (17 January 1997), pp. 334-343.
    by SA Levin, B Grenfell, A Hastings, AS Perelson
    posted to plants modelling biology by tg1w on 2008-11-19 10:23:56 as *** along with 2 people dumpa adriandefroment
  • Modelling plant resource allocation and growth partitioning in response to environmental heterogeneity
    Ecological Modelling, Vol. 181, No. 1. (10 January 2005), pp. 59-77.
    by Z Yang, D Midmore
    posted to plants modelling by tg1w on 2008-10-29 16:44:44 as ***
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