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Tag phylogeography [61 articles]

Recent papers classified by the tag phylogeography.
  • Global molecular phylogeography reveals persistent Arctic circumpolar isolation in a marine planktonic protist
    PNAS, Vol. 104, No. 12. (20 March 2007), pp. 5002-5007.
    by Kate F Darling, Michal Kucera, Christopher M Wade
    posted to phylogeny phylogeography by zwang on 2007-03-23 10:01:27 as **
  • Evolutionary History and Phylogeography of Human Viruses
    Annual Review of Microbiology, Vol. 62, No. 1. (2008), pp. 307-328.
    by Edward C Holmes
    posted to phylogeography evolution by zwang on 2008-09-13 02:49:21 as **
  • Phylogeography of the tree lizard, Urosaurus ornatus: responses of populations to past climate change
    Molecular Ecology, Vol. 16, No. 20. (October 2007), pp. 4321-4334.
    by GJ Haenel
    posted to climate-change phylogeography by yife on 2007-11-12 02:13:02 as ** along with 1 person pradiptaray
  • Mitochondrial and chloroplast phylogeography of Picea crassifolia Kom. (Pinaceae) in the Qinghai-Tibetan Plateau and adjacent highlands
    Molecular Ecology, Vol. 16, No. 19. (2007), pp. 4128-4137.
    by Lihua Meng, RUI Yang, Richard J Abbott, Georg Miehe, Tianhua Hu, Jianquan Liu
    posted to cpdna gene-flow mtdna phylogeography plateau postglacial recolonization tibetan by yife on 2007-11-12 02:31:17 as **
  • Phylogeography of the thermophilic cyanobacterium Mastigocladus laminosus.
    Appl Environ Microbiol, Vol. 73, No. 15. (August 2007), pp. 4751-4759.
    by SR Miller, RW Castenholz, D Pedersen
    posted to cyanobacteria ecology microbial phylogeography thermophyl by Thaverkamp on 2007-10-23 14:57:16 as read
  • Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. x divaricarpa, and A. holboellii (Brassicaceae)
    Molecular Ecology, Vol. 13, No. 2. (2004), pp. 349-370.
    by CH Dobes, T Mitchell-Olds, MA Koch
    posted to hybridization phylogeography statistics by TaqSys on 2007-03-06 11:15:22 as **
  • Population structure of Hypochaeris salzmanniana DC. (Asteraceae), an endemic species to the Atlantic coast on both sides of the Strait of Gibraltar, in relation to Quaternary sea level changes
    Molecular Ecology, Vol. 16, No. 3. (February 2007), pp. 541-552.
    by MA Ortiz, K Tremetsberger, S Talavera, T Stuessy, JL Garcia-Castano
    posted to mating_system mediterranean_area phylogeography by TaqSys on 2007-03-06 11:22:43 as **
  • Distinct geographic structure as evidenced by chloroplast DNA haplotypes and ploidy level in Japanese Aucuba (Aucubaceae)
    Am. J. Bot., Vol. 90, No. 11. (1 November 2003), pp. 1645-1652.
    by Tetsuo Ohi, Tadashi Kajita, Jin Murata
    posted to phylogeography polyploidy by TaqSys on 2007-09-12 11:05:40 as ** along with 1 person echinotrix
  • Where are the glacial refugia in Europe? Evidence from pteridophytes
    Biological Journal of the Linnean Society, Vol. 66, No. 1. (January 1999), pp. 23-37.
    by Johannes C Vogel, Frederick J Rumsey, Jakob J Schneller, John A Barrett, Mary Gibby
    posted to biogeography climate_change ecology phylogeography polyploidy by TaqSys on 2007-09-13 12:30:52 as ** along with 1 person echinotrix
  • THE AUTOMATION AND EVALUATION OF NESTED CLADE PHYLOGEOGRAPHIC ANALYSIS
    Evolution, Vol. 61, No. 6. (2007), pp. 1466-1480.
    by Mahesh Panchal, Mark A Beaumont
    posted to methods phylogeography statistics by TaqSys on 2007-06-06 10:24:28 as ** along with 1 person cjeans
  • Comparative phylogeography of unglaciated eastern North America
    Molecular Ecology, Vol. 15, No. 14. (December 2006), pp. 4261-4293.
    by Douglas E Soltis, Ashley B Morris, N Mclachla, S Jason, Paul S Manos, Pamela S Soltis
    posted to phylogeography by TaqSys on 2007-03-06 11:39:46 as ** along with 1 person pradiptaray
  • Phylogeography and conservation genetics of a giant lobelia (Lobelia giberroa) in Ethiopian and Tropical East African mountains
    Molecular Ecology, Vol. 16, No. 6. (March 2007), pp. 1233-1243.
    by Mulugeta Kebede, Dorothee Ehrich, Pierre Taberlet, Sileshi Nemomissa, Christian Brochmann
    posted to biogeography climate_change phylogeography by TaqSys on 2007-03-31 13:52:27 as **
  • Post-glacial history of the dominant alpine sedge Carex curvula in the European Alpine System inferred from nuclear and chloroplast markers
    Molecular Ecology, Vol. 17, No. 10. (May 2008), pp. 2417-2429.
    by M Puscas, P Choler, A Tribsch, L Gielly, D Rioux, M Gaudeul, P Taberlet
    posted to phylogeography by TaqSys on 2008-05-09 10:54:30 as **
  • Combined ecological niche modelling and molecular phylogeography revealed the evolutionary history of Hordeum marinum (Poaceae) niche differentiation, loss of genetic diversity, and speciation in Mediterranean Quaternary refugia
    Molecular Ecology, Vol. 16, No. 8. (April 2007), pp. 1713-1727.
    by Sabine S Jakob, Alexander Ihlow, Frank R Blattner
    posted to biogeography climate_change geographical_genetics mediterranean_area phylogeography by TaqSys on 2007-04-27 15:45:30 as **
  • Genetic diversity and spatial genetic structure of Pinus strobus (Pinaceae) across an island landscape inferred from allozyme and cpDNA markers
    Plant Systematics and Evolution, Vol. V264, No. 1. (5 March 2007), pp. 15-30.
    by ER Myers, MY Chung, MG Chung
    posted to mediterranean_area methods phylogeography by TaqSys on 2007-03-09 16:03:24 as **
  • Comparative phylogeography of the Veronica alpina complex in Europe and North America
    Molecular Ecology, Vol. 15, No. 11. (October 2006), pp. 3269-3286.
    by Dirk C Albach, Peter Schonswetter, Andreas Tribsch
    posted to phylogeography by TaqSys on 2007-03-06 11:29:06 as **
  • The automation of Nested Clade Phylogeographic Analysis
    Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 509-510.
    by Panchal, Mahesh
    posted to phylogeography software statistics by TaqSys on 2007-03-06 14:46:25 as ** along with 1 person pradiptaray
  • Late Quaternary history of Hippophae rhamnoides L. (Elaeagnaceae) inferred from chalcone synthase intron (Chsi) sequences and chloroplast DNA variation
    Molecular Ecology, Vol. 15, No. 13. (November 2006), pp. 4065-4083.
    by Igor V Bartish, Joachim W Kadereit, Hans PETER Comes
    posted to phylogeography by TaqSys on 2007-03-06 11:37:18 as **
  • Assessment of the diversity and species specificity of the mutualistic association between Epicephala moths and Glochidion trees
    Molecular Ecology, Vol. 15, No. 12. (2006), pp. 3567-3581.
    by Atsushi Kawakita, Makoto Kato
    posted to flower_biology phylogeography population_genetics by TaqSys on 2007-03-06 11:34:40 as **
  • Phylogeography of the Arctic-Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation
    Am. J. Bot., Vol. 90, No. 6. (1 June 2003), pp. 931-936.
    by Rolf Holderegger, Richard J Abbott
    posted to methods phylogeography by TaqSys on 2007-03-12 15:36:55 as **
  • Genetic enrichment of the arctic clonal plant Saxifraga cernua at its southern periphery via the alpine sexual Saxifraga sibirica
    Molecular Ecology, Vol. 15, No. 11. (October 2006), pp. 3401-3411.
    by Maxim V Kapralov, Tove M Gabrielsen, Ivan E Sarapultsev, Christian Brochmann
    posted to hybridization phylogeography by TaqSys on 2007-03-06 11:31:13 as **
  • Frequent Long-Distance Plant Colonization in the Changing Arctic
    Science, Vol. 316, No. 5831. (15 June 2007), pp. 1606-1609.
    by Inger G Alsos, Pernille B Eidesen, Dorothee Ehrich, Inger Skrede, Kristine Westergaard, Gro H Jacobsen, Jon Y Landvik, Pierre Taberlet, Christian Brochmann
    posted to biogeography long-distance_dispersal phylogeography by TaqSys on 2007-09-25 12:37:17 as ** along with 1 person echinotrix
  • Root Probabilities for Intraspecific Gene Trees under Neutral Coalescent Theory
    Molecular Phylogenetics and Evolution, Vol. 3, No. 2. (June 1994), pp. 102-113.
    by John Castelloe, Alan R Templeton
    posted to methods phylogeography statistics by TaqSys on 2007-03-12 08:00:12 as ** along with 1 person echinotrix
  • HISTORICAL RANGE EXPANSION DETERMINES THE PHYLOGENETIC DIVERSITY INTRODUCED DURING CONTEMPORARY SPECIES INVASION
    Evolution, Vol. 61, No. 2. (2007), pp. 334-345.
    by Douglas R Taylor, Stephen R Keller
    posted to evolution genetics geographical_genetics phylogeography by TaqSys on 2007-03-12 11:51:16 as **
  • Complex distribution patterns of di-, tetra-, and hexaploid cytotypes in the European high mountain plant Senecio carniolicus (Asteraceae)
    Am. J. Bot., Vol. 94, No. 8. (1 August 2007), pp. 1391-1401.
    by Jan Suda, Hanna Weiss-Schneeweiss, Andreas Tribsch, Gerald M Schneeweiss, Pavel Travnicek, Peter Schonswetter
    posted to phylogeography polyploidy by TaqSys on 2007-08-29 14:24:17 as ** along with 1 person echinotrix
  • Of clades and clans: terms for phylogenetic relationships in unrooted trees
    Trends in Ecology & Evolution, Vol. 22, No. 3. (March 2007), pp. 114-115.
    by Mark Wilkinson, James O Mcinerney, Robert P Hirt, Peter G Foster, Martin T Embley
    posted to methods phylogenetics phylogeography statistics by TaqSys on 2007-09-28 10:29:44 as ** along with 4 people and 2 groups dchughes echinotrix agg19954 tny G4ID Genetics-of-Gambling
  • Experimental design in intraspecific organelle DNA sequence studies I: haplotype detection methods
    Taxon, Vol. 56, No. 1. (February 2007), pp. 137-144.
    by Holt, Sierra, Bures, Petr
    posted to laboratory methods phylogeography population_genetics by TaqSys on 2007-08-29 14:18:15 as **
  • Geographic and Genetic Population Differentiation of the Amazonian Chocolate Tree (Theobroma cacao L)
    PLoS ONE, Vol. 3, No. 10. (1 October 2008), e3311.
    by Juan C Motamayor, Philippe Lachenaud, da Silva, Rey Loor, David N Kuhn, Steven J Brown, Raymond J Schnell
    posted to population_genetics plant phylogeography genotype ethnobotany domestication chocolate by stajich on 2008-10-02 00:22:28 as ** along with 1 person and 1 group dfs700 Berkeley Mycology
  • Evidence for strong inter- and intracontinental phylogeographic structure in Amanita muscaria, a wind-dispersed ectomycorrhizal basidiomycete.
    Molecular phylogenetics and evolution (29 April 2008)
    by József Geml, Rodham E E Tulloss, Gary A A Laursen, Nina A A Sazanova, D L L Taylor
    posted to amanita dispersal fungi mycorrhizal phylogeography population_genetics by stajich on 2008-06-15 23:42:10 as ** along with 1 person and 1 group pradiptaray Berkeley Mycology
  • Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa
    PNAS, Vol. 103, No. 25. (20 June 2006), pp. 9578-9583.
    by Jason P Londo, Yu-Chung Chiang, Kuo-Hsiang Hung, Tzen-Yuh Chiang, Barbara A Schaal
    posted to wild_rice speciation rice phylogeography oryza_genus introgression hybrid by scryrps on 2008-10-26 20:29:48 as ** along with 1 person jri
  • Phylogeographic support for horizontal gene transfer involving sympatric bruchid species
    Biology Direct, Vol. 1 (27 July 2006), 21.
    by Nadir Alvarez, Betty Benrey, Martine Hossaert-Mckey, Andrea Grill, Doyle Mckey, Nicolas Galtier
    posted to gene_transfer phylogeography by sanchezbuelna on 2008-07-29 01:37:51 as **
  • Phylogeny of the Genus Phaseolus (Leguminosae): A Recent Diversification in an Ancient Landscape
    Systematic Botany, Vol. 31, No. 4. (December 2006), pp. 779-791.
    by Delgado-Salinas, Alfonso, Bibler, Ryan, Lavin, Matt
    posted to legumes phaseolus phylogeny phylogeography by sanchezbuelna on 2008-07-29 17:49:30 as ****
  • Phylogenetic Relationships of New World Vicia (Leguminosae) Inferred from nrDNA Internal Transcribed Spacer Sequences and Floral Characters
    Systematic Botany, Vol. 33, No. 2. (June 2008), pp. 356-363.
    by Endo, Yasuhiko, Choi, Byoung-Hee, Ohashi, Hiroyoshi, Delgado-Salinas, Alfonso
    posted to legumes phylogeny phylogeography by sanchezbuelna on 2008-07-29 01:56:39 as ****
  • Maximum-Likelihood Estimation of Migration Rates and Effective Population Numbers in Two Populations Using a Coalescent Approach
    Genetics, Vol. 152, No. 2. (1 June 1999), pp. 763-773.
    by Peter Beerli, Joseph Felsenstein
    posted to coalescence maximum-likelihood phylogeography populations by sanchezbuelna on 2008-07-31 17:01:46 as ** along with 2 people and 1 group stevanspringer spavey FAB-lab
  • Old mice, young islands and competing biogeographical hypotheses
    Molecular Ecology, Vol. 16, No. 23. (December 2007), pp. 5070-5083.
    by VAN Zant, L Jeffrey, Michael C Wooten
    posted to phylogeography by ryanraaum on 2007-11-26 13:09:07 as **
  • Genetics of the Shimokita macaque population suggest an ancient bottleneck
    Primates (2007)
    by Yoshi Kawamoto, Ken-Ichiro Tomari, Shizuka Kawai, Sakie Kawamoto
    posted to phylogeography population-genetics primate update-when-final by ryanraaum on 2007-11-20 12:55:45 as **
  • Isolation by distance and sharp discontinuities in gene frequencies: implications for the phylogeography of an alpine insect species, Carabus solieri
    Molecular Ecology, Vol. 13, No. 7. (2004), pp. 1883-1897.
    by S Garnier, P Alibert, P Audiot, B Prieur, JY Rasplus
    posted to ibd phylogeography by ryanraaum on 2007-11-01 15:34:43 as **
  • The burgeoning field of statistical phylogeography
    Journal of Evolutionary Biology, Vol. 17, No. 1. (2004), pp. 1-10.
    by LL Knowles
    posted to demographic-history phylogeography population-genetics review statistics by ryanraaum on 2007-07-13 13:52:04 as **
  • Africans in Yorkshire? The deepest-rooting clade of the Y phylogeny within an English genealogy
    European Journal of Human Genetics, Vol. 15, No. current. (2007), pp. 288-293.
    by Turi E King, Emma J Parkin, Geoff Swinfield, Fulvio Cruciani, Rosaria Scozzari, Alexandra Rosa, Si-Keun Lim, Yali Xue, Chris Tyler-Smith, Mark A Jobling
    posted to coalescent demographic-history gene-flow migration phylogeography recommended y-chromosome y-snp y-str by ryanraaum on 2007-07-11 14:05:59 as *** along with 2 people and 2 groups Archaeogenetics dchughes G4ID Genetics-of-Gambling
  • Of mice and (Viking?) men: phylogeography of British and Irish house mice
    Proceedings of the Royal Society B: Biological Sciences
    by Jeremy B Searle, Catherine S Jones, İslam Gündüz, Moira Scascitelli, Eleanor P Jones, Jeremy S Herman, Victor R Rambau, Leslie R Noble, RJ Berry, Mabel D Giménez, Fríða Jóhannesdóttir
    posted to vikings phylogeography house-mouse genetics by roodubh on 2008-10-06 13:21:14 as **
  • Inferring the Demographic History and Rate of Adaptive Substitution in Drosophila
    PLoS Genetics, Vol. 2, No. 10. (1 October 2006), e166.
    by Haipeng Li, Wolfgang Stephan
    posted to drosophila evolution phylogeography selection by pradiptaray on 2008-07-16 18:03:20 as ** along with 1 person jri
  • Biogeographic Evolution of Madagascar's Microendemic Biota
    Science, Vol. 312, No. 5776. (19 May 2006), pp. 1063-1065.
    by Lucienne Wilme, Steven M Goodman, Jorg U Ganzhorn
    posted to phylogeography by pradiptaray on 2008-07-04 11:30:54 as ** along with 1 person and 1 group cmm FAB-lab
  • Historical and biological determinants of genetic diversity in the highly endemic triploid sea lavender Limonium dufourii (Plumbaginaceae)
    Molecular Ecology, Vol. 16, No. 18. (September 2007), pp. 3814-3827.
    by M Palop-Esteban, JG Segarra-Moragues, F Gonzalez-Candelas
    posted to ecology phylogeography by pradiptaray on 2008-07-01 16:29:48 as ** along with 1 person yife
  • Geography and genography: Prediction of continental origin using randomly selected single nucleotide polymorphisms
    BMC Genomics, Vol. 8 (10 March 2007), 68.
    by Dominic J Allocco, Qing Song, Gary H Gibbons, Marco F Ramoni, Isaac S Kohane
    posted to genography phylogeography snp by pradiptaray on 2008-07-01 16:28:48 as ** along with 2 people yife fmacciardi
  • The distribution of Quercus suber chloroplast haplotypes matches the palaeogeographical history of the western Mediterranean
    Molecular Ecology, Vol. 16, No. 24. (December 2007), pp. 5259-5266.
    by D Magri, S Fineschi, R Bellarosa, A Buonamici, F Sebastiani, B Schirone, MC Simeone, GG Vendramin
    posted to haplotype phylogeography by mbuhanan on 2008-03-20 20:08:12 as **
  • Nested clade analysis: an extensively validated method for strong phylogeographic inference
    Molecular Ecology, Vol. 0, No. 0. (0), pp. ???-???.
    by Alan R Templeton
    posted to phylogeography by maren on 2008-03-24 00:52:26 as **
  • Climate changes and tree phylogeography in the Mediterranean
    Taxon, Vol. 54, No. 4. (November 2005), pp. 877-885.
    by Remy J Petit, Arndt Hampe, Rachid Cheddadi
    posted to phylogeography by kehan on 2006-03-14 10:49:28 as * along with 3 groups biodiversity_conservation Bioinformatics GrassBase
  • Historical divergence vs. contemporary gene flow: evolutionary history of the calcicole Ranunculus alpestris group (Ranunculaceae) in the European Alps and the Carpathians.
    Molecular ecology (21 August 2008)
    by O Paun, P Schönswetter, M Winkler, Intrabiodiv Consortium, A Tribsch
    posted to refugia ranunculus-alpestris phylogeography migration hybridization gene-flow endemism aflp by jbyoder on 2008-09-26 18:17:14 as read along with 1 person echinotrix
  • Population Graphs: the graph theoretic shape of genetic structure.
    Mol Ecol, Vol. 13, No. 7. (July 2004), pp. 1713-1727.
    by RJ Dyer, JD Nason
    posted to phylogeography networks graph-theory genetic-structure by jbyoder on 2008-09-22 23:29:56 as read along with 3 people timflutre madhadron compbio
  • The mtDNA legacy of the Levantine early Upper Palaeolithic in Africa.
    Science, Vol. 314, No. 5806. (15 December 2006), pp. 1767-1770.
    by A Olivieri, A Achilli, M Pala, V Battaglia, S Fornarino, N Al-Zahery, R Scozzari, F Cruciani, DM Behar, JM Dugoujon, C Coudray, AS Santachiara-Benerecetti, O Semino, HJ Bandelt, A Torroni
    posted to mtdna north_africa phylogeography upper_paleolithic by hawksjohnd on 2006-12-19 06:59:16 as ** along with 1 person Archaeogenetics
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