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Tag pathway [542 articles]

Recent papers classified by the tag pathway.
  • Dynamics and Design Principles of a Basic Regulatory Architecture Controlling Metabolic Pathways
    PLoS Biology, Vol. 6, No. 6. (1 June 2008), e146.
    by Chen-Shan Chin, Victor Chubukov, Emmitt R Jolly, Joe Derisi, Hao Li
    posted to metabolism pathway regulatory by zwang on 2008-06-27 04:07:53 as ** along with 4 people djkt marck michaelbarton jjray
  • Structure-based design of a pathway-specific nuclear import inhibitor
    Nature Structural & Molecular Biology, Vol. 14, No. 5. (15 April 2007), pp. 452-454.
    by Ahmet E Cansizoglu, Brittany J Lee, Zi C Zhang, Beatriz MA Fontoura, Yuh M Chook
    posted to design nuclear pathway structure by zwang on 2007-05-08 11:53:58 as **
  • From Pathways Databases to Network Models of Switching Behavior
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e152.
    by Baltazar D Aguda, Andrew B Goryachev
    posted to database modeling network pathway by zwang on 2007-11-02 08:00:02 as ** along with 4 people giovenko bayesian julius Ema
  • A Genomewide Functional Network for the Laboratory Mouse
    PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000165.
    by Yuanfang Guan, Chad L Myers, Rong Lu, Ihor R Lemischka, Carol J Bult, Olga G Troyanskaya
    posted to pathway network by zwang on 2008-10-20 01:55:47 as ** along with 7 people biomcgary cswinburne pengchy ptrobajo guhjy grahamc tmmurali
  • RNA-mediated epigenetic programming of a genome-rearrangement pathway
    Nature (28 November 2007)
    by Mariusz Nowacki, Vikram Vijayan, Yi Zhou, Klaas Schotanus, Thomas G Doak, Laura F Landweber
    posted to epigenetics genome pathway rna by zwang on 2008-01-10 01:42:38 as ** along with 6 people balicea mtagaya sebastien_vigneau margaritis rebeccamancy rschulz
  • Regulatory Pathway Analysis by High-Throughput In Situ Hybridization
    PLoS Genetics, Vol. 3, No. 10. (1 October 2007), e178.
    by Axel Visel, James Carson, Judit Oldekamp, Marei Warnecke, Vladimira Jakubcakova, Xunlei Zhou, Chad A Shaw, Gonzalo Alvarez-Bolado, Gregor Eichele
    posted to clustering experiment pathway regulatory by zwang on 2007-10-22 07:22:15 as **
  • The liver pharmacological and xenobiotic gene response repertoire
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Georges Natsoulis, Cecelia I Pearson, Jeremy Gollub, Eynon, Joe Ferng, Ramesh Nair, Radha Idury, May D Lee, Mark R Fielden, Richard J Brennan, Alan H Roter, Kurt Jarnagin
    posted to clustering gene human metabolism pathway by zwang on 2008-03-27 05:07:04 as ** along with 5 people and 1 group guhjy caseybrown aubinhon ptrobajo shikin Integrative_biology_behavior
  • A comprehensive modular map of molecular interactions in RB/E2F pathway
    Mol Syst Biol, Vol. 4 (4 March 2008)
    by Laurence Calzone, Amelie Gelay, Andrei Zinovyev, Francois Radvanyl, Emmanuel Barillot
    posted to interaction pathway by zwang on 2008-03-06 04:31:27 as ** along with 2 people jfr thomaskelder
  • A systems biology approach for pathway level analysis
    Genome Res. (4 September 2007), gr.6202607.
    by Sorin Draghici, Purvesh Khatri, Adi L Tarca, Kashyap Amin, Arina Done, Calin Voichita, Constantin Georgescu, Roberto Romero
    posted to network pathway system by zwang on 2007-09-05 04:04:19 as * along with 17 people and 3 groups ptrobajo pengchy tmmurali dragonrez jfr gurkanbebek grahamc shigepong cabbagezs cerami xingxu shikin idonaldson Pao-Yang thomaskelder heliopais AlexanderPico Bioinformatics ParkinsonLab_at_MaRS OPIG
  • Pathway analysis of gene signatures predicting metastasis of node-negative primary breast cancer
    BMC Cancer, Vol. 7 (25 September 2007), 182.
    by Jack X Yu, Anieta M Sieuwerts, Yi Zhang, John WM Martens, Marcel Smid, Jan GM Klijn, Yixin Wang, John A Foekens
    posted to signature pathway node negative metastasis gene-expression cancer breast by Zephyrus on 2008-10-05 20:34:58 as ** along with 2 people and 1 group jfr ealloza BioinfoCIPF
  • Interplay between liganded and orphan nuclear receptors controls reproductive pathways.
    Biochemistry and cell biology = Biochimie et biologie cellulaire, Vol. 78, No. 3. (2000), pp. 345-358.
    by R Métivier, Y Le Dréan, G Salbert, F Pakdel
    posted to xenoestrogen reproduction pathway mechanism estrogen by Zephyrus on 2008-11-30 17:21:34 as **
  • Immunosuppressive mechanisms in human tumors: Why we still cannot cure cancer.
    Immunol Lett, Vol. 116, No. 1. (15 February 2008), pp. 7-14.
    by S Gross, P Walden
    posted to tumour thesis review pathway mechanism immune-supression background by Zephyrus on 2008-11-29 03:53:53 as ** along with 1 person guhjy
  • Ecological and evolutionary forces shaping microbial diversity in the human intestine.
    Cell, Vol. 124, No. 4. (24 February 2006), pp. 837-848.
    by RE Ley, DA Peterson, JI Gordon
    posted to pathway microbiota microbiome ley gut evolution diversity by Zephyrus on 2008-10-14 18:01:45 as ** along with 3 people and 1 group nickluscombe wenhan crazypumpkin EBI-regulation
  • Stem cell trafficking in tissue development, growth, and disease.
    Cell, Vol. 132, No. 4. (22 February 2008), pp. 612-630.
    by DJ Laird, UH von Andrian, AJ Wagers
    posted to traffic stem-cell pathway by Zephyrus on 2008-10-20 21:35:05 as ** along with 1 person ajaymalik
  • beta-estradiol suppresses T cell-mediated delayed-type hypersensitivity through suppression of antigen-presenting cell function and Th1 induction.
    International archives of allergy and immunology, Vol. 121, No. 2. (February 2000), pp. 161-169.
    by ML Salem, G Matsuzaki, K Kishihara, GA Madkour, K Nomoto
    posted to thesis th2 th1 pathway estrogen dth apc by Zephyrus on 2008-10-16 18:36:25 as **
  • Pathways connecting inflammation and cancer
    Current Opinion in Genetics & Development, Vol. 18, No. 1. (February 2008), pp. 3-10.
    by Paola Allavena, Cecilia Garlanda, Maria G Borrello, Antonio Sica, Alberto Mantovani
    posted to pathway inflammation cancer-crosstalk cancer by Zephyrus on 2008-09-15 05:42:36 as ** along with 2 people and 1 group guhjy olberd Roswell Cancer Crosstalk
  • Mechanisms of Disease: prediction and prevention of breast cancer--cellular and molecular interactions.
    Nature clinical practice. Oncology, Vol. 2, No. 12. (December 2005), pp. 635-646.
    by A Howell, AH Sims, KR Ong, MN Harvie, DG Evans, RB Clarke
    posted to reference prevention pathway mechanism cancer breast by Zephyrus on 2008-11-28 14:19:09 as ** along with 1 person and 2 groups jfr References Breast Cancer Reading Club
  • Age-specific differences in oncogenic pathway deregulation seen in human breast tumors.
    PLoS ONE, Vol. 3, No. 1. (2008)
    by CK Anders, CR Acharya, DS Hsu, G Broadwater, K Garman, JA Foekens, Y Zhang, Y Wang, K Marcom, JR Marks, S Mukherjee, JR Nevins, KL Blackwell, A Potti
    posted to pathway oncogene deregulation comparisons cancer breast age by Zephyrus on 2008-10-05 20:54:48 as ** along with 1 person jfr
  • Estrogen Induces Lung Metastasis through a Host Compartment-Specific Response
    Cancer Res, Vol. 66, No. 7. (1 April 2006), pp. 3667-3672.
    by Carole L Banka, Caren V Lund, Mai T Nguyen, Andrew J Pakchoian, Barbara M Mueller, Brian P Eliceiri
    posted to thesis pathway metastasis mechanism lung interesting immune estrogen background by Zephyrus on 2008-11-28 23:37:13 as **
  • Recent insight on the control of enzymes involved in estrogen formation and transformation in human breast cancer
    The Journal of Steroid Biochemistry and Molecular Biology, Vol. 93, No. 2-5. (February 2005), pp. 221-236.
    by J Pasqualini, G Chetrite
    posted to review perspective pathway evolution estrogen enzyme cancer-crosstalk cancer breast by Zephyrus on 2008-11-09 16:23:01 as ** along with 1 group Breast Cancer Reading Club
  • An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer.
    BMC genomics, Vol. 9 Suppl 1 (2008)
    by M Xu, MC Kao, J Nunez-Iglesias, JR Nevins, M West, XJ Zhou
    posted to pathway molecular cancer breast by Zephyrus on 2008-10-05 20:33:25 as ** along with 3 people guhjy cswinburne jfr
  • Molecular epidemiology, cancer-related symptoms, and cytokines pathway.
    The lancet oncology, Vol. 9, No. 8. (August 2008), pp. 777-785.
    by CC Reyes-Gibby, X Wu, M Spitz, R Kurzrock, M Fisch, E Bruera, S Shete
    posted to cytokine pathway thesis polymorphisms epidemiology confounder cancer by Zephyrus on 2008-09-15 18:18:20 as ** along with 1 person and 2 groups guhjy Roswell Cancer Crosstalk References
  • The Role of Endocrine Insulin-Like Growth Factor-I and Insulin in Breast Cancer
    Journal of Mammary Gland Biology and Neoplasia
    by Danielle Lann, Derek Leroith
    posted to pathway insulin endocrine cancer breast by Zephyrus on 2008-11-30 19:07:20 as **
  • Intracellular redox status and oxidative stress: implications for cell proliferation, apoptosis, and carcinogenesis.
    Archives of toxicology, Vol. 82, No. 5. (May 2008), pp. 273-299.
    by JM Matés, JA Segura, FJ Alonso, J Márquez
    posted to pathway thesis stress ros review oxidative inflammation confounder cancer antioxidants by Zephyrus on 2008-09-15 18:29:14 as ** along with 1 person guhjy
  • notes Changes in breast cancer transcriptional profiles after treatment with the aromatase inhibitor, letrozole.
    Pharmacogenetics and genomics, Vol. 17, No. 10. (October 2007), pp. 813-826.
    by WR Miller, AA Larionov, L Renshaw, TJ Anderson, S White, J Murray, E Murray, G Hampton, JR Walker, S Ho, A Krause, DB Evans, JM Dixon
    posted to transcription signature profile pathway mechanism letrozole cancer breast aromatase by Zephyrus on 2008-11-28 14:08:43 as ** along with 1 person and 1 group jfr Breast Cancer Reading Club
  • Effects of estrogen receptor subtype-selective agonists on immune functions in ovariectomized mice
    International Immunopharmacology, Vol. 6, No. 9. (September 2006), pp. 1413-1423.
    by J Li, R Mcmurray
    posted to thesis subtypes receptor pathway mechanism immunomodulation estrogen confounder by Zephyrus on 2008-11-18 19:08:35 as **
  • Vitamin D receptor regulation of the steroid/bile acid sulfotransferase SULT2A1.
    Methods in enzymology, Vol. 400 (2005), pp. 165-191.
    by B Chatterjee, I Echchgadda, CS Song
    posted to xenoestrogen vitd pathway metabolism mechanism common-mechanisms by Zephyrus on 2008-11-30 17:09:07 as **
  • Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences
    Cell, Vol. 135, No. 2. (17 October 2008), pp. 216-226.
    by A Raj, A Vanoudenaarden
    posted to pathway stochastic gene-expression cell cancer-crosstalk cancer by Zephyrus on 2008-11-06 21:12:33 as ** along with 6 people and 1 group GustavoLacerda samgj erel10 ocs sg45653 jjray Roswell Cancer Crosstalk
  • Mechanisms of malignant progression
    Carcinogenesis, Vol. 29, No. 6. (1 June 2008), pp. 1092-1095.
    by Robert A Weinberg
    posted to thesis progression pathway mechanism cancer-crosstalk cancer background by Zephyrus on 2008-11-29 10:00:51 as ** along with 1 group Roswell Cancer Crosstalk
  • Can fat explain the human brain's big bang evolution?—Horrobin's leads for comparative and functional genomics
    Prostaglandins, Leukotrienes and Essential Fatty Acids, Vol. 70, No. 4. (April 2004), pp. 345-347.
    by T Erren
    posted to read pathway obesity metabolism evolution epidemiology adipose by Zephyrus on 2008-11-09 16:29:21 as **
  • Cancer is a Preventable Disease that Requires Major Lifestyle Changes.
    Pharmaceutical research, Vol. 25, No. 9. (September 2008), pp. 2097-2116.
    by P Anand, AB Kunnumakara, C Sundaram, KB Harikumar, ST Tharakan, OS Lai, B Sung, BB Aggarwal
    posted to pathway thesis review prevention modifiable lifestyle inflammation etiology cancer by Zephyrus on 2008-09-15 18:34:10 as ** along with 2 people and 1 group misonneh guhjy Roswell Cancer Crosstalk
  • The developmental origins of health and disease: current theories and epigenetic mechanisms.
    Society of Reproduction and Fertility supplement, Vol. 64 (2007), pp. 425-443.
    by KD Sinclair, RG Lea, WD Rees, LE Young
    posted to prenatal read pathway natal mechanism epigenetics disease development by Zephyrus on 2008-11-13 02:13:30 as ** along with 1 group R.E.A.D
  • Estrogen Receptor-Positive and Estrogen Receptor-Negative Human Breast Cancer Cells: Regulation of Expression of Cancer-Related Genes by Estradiol and Tamoxifen
    Current Signal Transduction Therapy, Vol. 3, No. 1. (January 2008), pp. 7-21.
    by Murthy, Ven, Yuan, Xia, Liu, Guojin
    posted to thesis receptor pathway non-traditional mitochondria estrogen antioxidant by Zephyrus on 2008-12-01 00:02:09 as **
  • Recurrence dynamics does not depend on the recurrence site
    Breast Cancer Research, Vol. 10, No. 5. (2008)
    by Romano Demicheli, Elia Biganzoli, Patrizia Boracchi, Marco Greco, Michael Retsky
    posted to statistics pathway model metastasis lung cancer breast by Zephyrus on 2008-10-13 02:49:02 as ** along with 1 person and 2 groups songpku Roswell Cancer Crosstalk Breast Cancer Reading Club
  • Reactive oxygen species and angiogenesis: NADPH oxidase as target for cancer therapy.
    Cancer letters, Vol. 266, No. 1. (18 July 2008), pp. 37-52.
    by M Ushio-Fukai, Y Nakamura
    posted to pathway web-study stress ros cancer antioxidants angiogenesis by Zephyrus on 2008-09-15 18:29:58 as ** along with 1 person guhjy
  • Unregulated inflammation shortens human functional longevity.
    Inflammation research : official journal of the European Histamine Research Society ... [et al.], Vol. 49, No. 11. (November 2000), pp. 561-570.
    by SA Brod
    posted to pathway mechanism lifespan inflammation by Zephyrus on 2008-11-17 15:36:12 as ** along with 1 person and 1 group annathomson References
  • Energy cost of infection burden: An approach to understanding the dynamics of host–pathogen interactions
    Journal of Theoretical Biology, Vol. 241, No. 1. (07 July 2006), pp. 1-13.
    by A Romanyukha, S Rudnev, I Sidorov
    posted to statistics read pathway model infection immunology immune evolution energy balance by Zephyrus on 2008-11-09 18:50:29 as ** along with 1 group R.E.A.D
  • Racial disparities in breast cancer outcome
    Cancer, Vol. 110, No. 9. (2007), pp. 1880-1888.
    by Romano Demicheli, Michael W Retsky, William JM Hrushesky, Michael Baum, Isaac D Gukas, Ismail Jatoi
    posted to disparities pathway review outcome mechanism caucasian cancer breast african-american by Zephyrus on 2008-11-19 13:47:25 as ** along with 1 group Breast Cancer Reading Club
  • Cytokine loops driving senescence
    Nature Cell Biology, Vol. 10, No. 8., pp. 887-889.
    by Jiri Bartek, Zdenek Hodny, Jiri Lukas
    posted to cytokine pathway thesis senescence confounder cancer by Zephyrus on 2008-09-16 00:26:13 as ** along with 1 person guhjy
  • Plasma levels and pharmacokinetics of ethynyl estrogens in various populations I. Ethynylestradiol
    Contraception, Vol. 21, No. 1. (January 1980), pp. 1-16.
    by J Goldzieher
    posted to pathway population pharmacokinetics metabolism mechanism estrogen comparisons by Zephyrus on 2008-11-17 02:15:08 as ***** along with 1 group Estrogen Nation
  • The combination of high cyclin E and Skp2 expression in breast cancer is associated with a poor prognosis and the basal phenotype
    Human Pathology, Vol. 39, No. 10. (October 2008), pp. 1431-1437.
    by David Voduc, Torsten O Nielsen, Maggie C Cheang, William D Foulkes
    posted to pathway skp2 phenotype journal-club cyclin-e cancer breast basal by Zephyrus on 2008-09-16 16:36:13 as ** along with 1 group Breast Cancer Reading Club
  • Tissue-specific transcripts of human steroid sulfatase are under control of estrogen signaling pathways in breast carcinoma
    The Journal of Steroid Biochemistry and Molecular Biology, Vol. 105, No. 1-5. (June 2007), pp. 76-84.
    by T Zaichuk, D Ivancic, D Scholtens, C Schiller, S Khan
    posted to sulfatase signalling receptor pathway metabolism estrogen cancer breast by Zephyrus on 2008-11-09 18:25:08 as ** along with 1 group Breast Cancer Reading Club
  • Nutrition, hormones, and breast cancer: Is insulin the missing link?
    Cancer Causes and Control, Vol. 7, No. 6. (1 November 1996), pp. 605-625.
    by Rudulf Kaaks
    posted to hormone pathway nutrition mechanism insulin cancer breast by Zephyrus on 2008-11-17 21:05:06 as **
  • Regulation of the immune response to cestode infection by progesterone is due to its metabolism to estradiol
    Microbes and Infection, Vol. 7, No. 3. (March 2005), pp. 485-493.
    by J Vargasvillavicencio, C Larralde, M Deleonnava, J Moralesmontor
    posted to thesis th2 th1 progesterone pathway pathogenesis parasitic metabolism infection estrogen by Zephyrus on 2008-10-17 02:48:53 as **
  • Genetic association analysis of copy-number variation (CNV) in human disease pathogenesis.
    Genomics (23 September 2008)
    by Iuliana Ionita-Laza, Angela J J Rogers, Christoph Lange, Benjamin A A Raby, Charles Lee
    posted to pathway pathogenesis genomics cnv cancer-crosstalk by Zephyrus on 2008-10-06 02:47:31 as ** along with 1 group Roswell Cancer Crosstalk
  • Interleukin-8 Expression Is Regulated by Histone Deacetylases through the Nuclear Factor-kappaB Pathway in Breast Cancer
    Mol Pharmacol, Vol. 74, No. 5. (1 November 2008), pp. 1359-1366.
    by Carine Chavey, Marcus Muhlbauer, Carine Bossard, Ariane Freund, Sebastien Durand, Christian Jorgensen, Christian Jobin, Gwendal Lazennec
    posted to pathway nf-kappab il8 histone cancer breast by Zephyrus on 2008-11-09 17:57:44 as ** along with 1 group Breast Cancer Reading Club
  • Epithelial-mesenchymal transition (EMT) is not sufficient for spontaneous murine breast cancer metastasis.
    Developmental dynamics : an official publication of the American Association of Anatomists, Vol. 237, No. 10. (October 2008), pp. 2755-2768.
    by Y Lou, O Preobrazhenska, U Auf dem Keller, M Sutcliffe, L Barclay, PC McDonald, C Roskelley, CM Overall, S Dedhar
    posted to rat pathway metastasis emt cancer breast by Zephyrus on 2008-10-13 02:52:19 as ** along with 1 group Breast Cancer Reading Club
  • Estrone sulfate (E1S), a prognosis marker for tumor aggressiveness in prostate cancer (PCa)☆
    The Journal of Steroid Biochemistry and Molecular Biology, Vol. 109, No. 1-2. (March 2008), pp. 158-167.
    by F Giton, A Delataille, Y Allory, H Galons, F Vacherot, P Soyeux, C Abbou, S Loric, O Cussenot, J Raynaud
    posted to pathway shift prostate prognosis estrogen cancer by Zephyrus on 2008-10-31 05:48:20 as **
  • Hyaluronan in human tumors: pathobiological and prognostic messages from cell-associated and stromal hyaluronan.
    Seminars in cancer biology, Vol. 18, No. 4. (August 2008), pp. 288-295.
    by RH Tammi, A Kultti, VM Kosma, R Pirinen, P Auvinen, MI Tammi
    posted to pathway tumour stroma microenvironment hyaluronan cancer by Zephyrus on 2008-09-15 18:31:16 as ** along with 1 person guhjy
  • Overweight/obesity and cancer genesis: More than a biological link
    Biomedicine & Pharmacotherapy, Vol. 61, No. 10. (December 2007), pp. 665-678.
    by P Irigaray, J Newby, S Lacomme, D Belpomme
    posted to xenobiotics read pathway obesity environment biology by Zephyrus on 2008-11-24 23:05:27 as **
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