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Tag pairwise [22 articles]

Recent papers classified by the tag pairwise.
  • Multiple sequence alignment in phylogenetic analysis.
    Mol Phylogenet Evol, Vol. 16, No. 3. (September 2000), pp. 317-330.
    by A Phillips, D Janies, W Wheeler
    posted to alignments and homology pairwise by ziquje on 2005-05-16 16:50:18 as ** along with 1 person stormybriggs
  • Pash: Efficient Genome-Scale Sequence Anchoring by Positional Hashing
    Genome Res., Vol. 14, No. 4. (1 April 2004), pp. 672-678.
    by Ken J Kalafus, Andrew R Jackson, Aleksandar Milosavljevic
    posted to 212 cited detection pairwise te by yoanjacquemin on 2008-01-16 08:24:48 as read
  • BLAT--the BLAST-like alignment tool.
    Genome Res, Vol. 12, No. 4. (April 2002), pp. 656-664.
    by WJ Kent
    posted to 212 cited pairwise prediction te by yoanjacquemin on 2008-01-16 08:19:02 as read along with 23 people and 1 group daforerog pwais umit mmartin paszkows operon miguel pcahan1 Ayest indigoviolet mtagaya treangen michC djkt timflutre olympos cjeans wenhan natstreet antonkratz talponer bozdagd gpappas EisenLab
  • Round Robin Rule Learning
    (2001), pp. 146-153.
    by Johannes F&\#252;rnkranz
    posted to classification pairwise by xiaoyan2006 on 2007-04-24 19:37:22 as read along with 1 group VT_DLRL
  • Differences between pair-wise and multi-sequence alignment methods affect vertebrate genome comparisons
    Trends in Genetics, Vol. 22, No. 4. (April 2006), pp. 187-193.
    by Elliott H Margulies, Christina W Chen, Eric D Green
    posted to sequence review pairwise multiple alignment accuracy 2006 by treangen on 2008-11-22 21:44:02 as ** along with 4 people and 2 groups shirleym dchughes smount gjuggler G4ID Genetics-of-Gambling
  • Enredo and Pecan: Genome-wide mammalian consistency-based multiple alignment with paralogs.
    Genome research (10 October 2008)
    by Benedict Paten, Javier Herrero, Kathryn Beal, Stephen Fitzgerald, Ewan Birney
    posted to software pipeline pecan pairwise homology-map genome-aligment ensembl by treangen on 2008-11-21 10:09:40 as ** along with 3 people rschulz Neeperando gjuggler
  • Evolutionary distance estimation and fidelity of pair wise sequence alignment.
    BMC bioinformatics, Vol. 6 (2005)
    by MS Rosenberg
    posted to sequence pairwise evolutionary distance alignment accuracy 2005 by treangen on 2008-11-25 12:47:21 as **
  • A local alignment tool for very long DNA sequences
    Comput. Appl. Biosci., Vol. 11, No. 2. (1 April 1995), pp. 147-153.
    by Kun-Mao Chao, Jinghui Zhang, James Ostell, Webb Miller
    posted to software sim2 pairwise local-alignment genome dna-sequences by treangen on 2008-11-21 09:57:17 as ** along with 1 person timflutre
  • Use of microsatellite loci to classify individuals by relatedness
    Molecular Ecology, Vol. 5, No. 3. (1996), pp. 393-401.
    by MS Blouin, M Parsons, V Lacaille, S Lotz
    posted to pairwise pedrecon by tkdoerksen on 2008-03-04 16:49:55 as read
  • The whole alignment and nothing but the alignment: the problem of spurious alignment flanks.
    Nucleic acids research (16 September 2008)
    by Martin C C Frith, Yonil Park, Sergey L L Sheetlin, John L L Spouge
    posted to pairwise evolution bioinformatics alignment by sebastien_vigneau on 2008-09-19 18:17:36 as ** along with 4 people and 1 group maximilianh Neeperando cisevol nuin BergmanLab
  • Classification on pairwise proximity data
    (1999)
    by T Graepel, R Herbrich, K Obermayer
    posted to classification pairwise similarity by scis0000001 on 2006-09-09 15:54:01 as **
  • Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced bacterial genomes
    FEMS Microbiology Letters, Vol. 228, No. 1. (7 November 2003), pp. 45-49.
    by Tom Coenye, Peter Vandamme
    posted to 16s pairwise by nghoffma on 2006-10-28 19:03:03 as **
  • Is the Ewald summation still necessary? Pairwise alternatives to the accepted standard for long-range electrostatics
    The Journal of Chemical Physics, Vol. 124, No. 23. (2006)
    by Christopher J Fennell, Daniel J Gezelter
    posted to algorithm binary cutoff dynamics ewald grid molecular pairwise summation by michaelbussmann on 2008-02-28 16:43:01 as ** along with 3 people and 1 group mikaellund OndrejMarsalek sobolevnrm baker-group
  • StructSorter: a method for continuously updating a comprehensive protein structure alignment database.
    J Chem Inf Model, Vol. 46, No. 4. (g 2006), pp. 1871-1876.
    by B Palmer, JF Danzer, K Hambly, DA Debe
    posted to alignment database pairwise structure by dimka on 2006-09-21 18:31:26 as **
  • Molecular Transformations as a Way of Finding and Exploiting Consistent Local QSAR
    J. Chem. Inf. Model., Vol. 46, No. 1. (23 January 2006), pp. 180-192.
    by RP Sheridan, P Hunt, JC Culberson
    posted to pairwise qsar by daevans on 2007-11-03 17:48:22 as **
  • Computation of Octanol-Water Partition Coefficients by Guiding an Additive Model with Knowledge
    J. Chem. Inf. Model. (7 November 2007)
    by T Cheng, Y Zhao, X Li, F Lin, Y Xu, X Zhang, Y Li, R Wang, L Lai
    posted to logp pairwise by daevans on 2007-11-23 12:49:52 as **
  • Essential bacterial functions encoded by gene pairs.
    J Bacteriol, Vol. 189, No. 2. (January 2007), pp. 591-602.
    by HB Thomaides, EJ Davison, L Burston, H Johnson, DR Brown, AC Hunt, J Errington, L Czaplewski
    posted to pairwise function by cjeans on 2007-02-10 05:08:27 as **
  • Natural-like function in artificial WW domains
    Nature, Vol. 437, No. 7058. (2005), pp. 579-583.
    by W Russ, D Lowery, P Mishra, M Yaffe, R Ranganathan
    posted to coevolution covariation design domain pairwise protein ww by ca3295 on 2008-03-18 10:29:38 as read along with 6 people and 5 groups ana barry balajis marcius caporaso bethbromley structural_bioinformatics Bioinformatics biomedical-nlp BioinfoCIPF SGU-CIPF
  • Evolutionary information for specifying a protein fold
    Nature, Vol. 437, No. 7058. (2005), pp. 512-518.
    by M Socolich, S Lockless, W Russ, Heather Lee, Kevin Gardner, Rama Ranganathan
    posted to coevolution covariation design domain pairwise protein ww by ca3295 on 2008-03-18 10:30:26 as read along with 14 people and 5 groups ana barry lna bpb Einat balajis marcius gbart analogAI nirfriedman caporaso massivemayhem mingzhi bethbromley structural_bioinformatics Bioinformatics biomedical-nlp BioinfoCIPF SGU-CIPF
  • Multiclass linear dimension reduction by weighted pairwise Fisher criteria
    Pattern Analysis and Machine Intelligence, IEEE Transactions on, Vol. 23, No. 7. (2001), pp. 762-766.
    by M Loog, RPW Duin, R Haeb-Umbach
    posted to dimension_reduction pairwise pattern_recognition by Borelli on 2006-01-19 12:33:13 as read
  • Combining pairwise sequence similarity and support vector machines for remote protein homology detection
    (2002)
    by L Liao, W Noble
    posted to homology pairwise prediction svm by bioinfo on 2005-11-09 11:22:52 as ** along with 1 person scis0000001
  • Haplotype homozygosity and derived alleles in the human genome.
    Am J Hum Genet, Vol. 78, No. 6. (June 2006), pp. 1053-1059.
    by AE Fry, CJ Trafford, MA Kimber, MS Chan, KA Rockett, DP Kwiatkowski
    posted to haplotype pairwise by ashandanj on 2006-07-18 02:22:24 as ** along with 2 people bpb balajis
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