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Tag p-loop [15 articles]

Recent papers classified by the tag p-loop.
  • Evolution and Classification of P-loop Kinases and Related Proteins
    Journal of Molecular Biology, Vol. 333, No. 4. (31 October 2003), pp. 781-815.
    by Detlef D Leipe, Eugene V Koonin, L Aravind
    posted to domain evolution p-loop by tny on 2006-05-07 05:59:21 as **
  • A novel family of P-loop NTPases with an unusual phyletic distribution and transmembrane segments inserted within the NTPase domain.
    Genome Biol, Vol. 5, No. 5. (2004)
    by L Aravind, LM Iyer, DD Leipe, EV Koonin
    posted to domain evolution p-loop by tny on 2006-01-31 05:50:32 as ** along with 2 people and 3 groups tharris barry C. elegans / WormBase structural_bioinformatics Bioinformatics
  • Evolutionary history and higher order classification of AAA+ ATPases
    Journal of Structural Biology, Vol. 146, No. 1-2. (April 2004), pp. 11-31.
    by Lakshminarayan M Iyer, Detlef D Leipe, Eugene V Koonin, L Aravind
    posted to domain evolution p-loop by tny on 2006-05-07 05:59:41 as ** along with 1 person leemary4
  • Classification and evolution of P-loop GTPases and related ATPases.
    J Mol Biol, Vol. 317, No. 1. (15 March 2002), pp. 41-72.
    by DD Leipe, YI Wolf, EV Koonin, L Aravind
    posted to domain evolution p-loop by tny on 2006-05-07 05:59:40 as ** along with 4 people and 2 groups laurabailey barry Einat leemary4 structural_bioinformatics Bioinformatics
  • Behavior of water molecules in ATPase pocket of myosin
    Journal of Molecular Structure: THEOCHEM, Vol. In Press, Corrected Proof
    by Kazunori Yamanaka, Noriaki Okimoto, Saburo Neya, Masayuki Hata, Tyuji Hoshino
    posted to myosin nucleotide_analogues p-loop protein_dynamics protein_structure by barry to the group Bioinformatics on 2006-01-02 20:09:44 as **** along with 1 group structural_bioinformatics
  • Molecular switch for signal transduction: structural differences between active and inactive forms of protooncogenic ras proteins.
    Science, Vol. 247, No. 4945. (23 February 1990), pp. 939-945.
    by MV Milburn, L Tong, AM deVos, A Brünger, Z Yamaizumi, S Nishimura, SH Kim
    posted to review ras p-loop ntp g_proteins allosteric by barry to the group Bioinformatics on 2007-01-16 20:21:14 as ** along with 4 people and 1 group Einat laurabailey allmensch gloria structural_bioinformatics
  • Multivariate Analysis of Conserved Sequence-Structure Relationships in Kinesins: Coupling of the Active Site and a Tubulin-binding Sub-domain
    Journal of Molecular Biology, Vol. 368, No. 5. (18 May 2007), pp. 1231-1248.
    by Barry J Grant, Andrew J Mccammon, Leo S Caves, Robert A Cross
    posted to torsion_angles swi-swii structural_bioinformatics sca r protein_structure protein_sequence protein_dynamics pca p-loop ntpases molecular_motors mine kinesin domain_motions correlated_motions core_structure clustering bioinf_methods by barry to the group Bioinformatics on 2007-04-27 17:41:06 as read along with 3 people and 1 group choonpeng cactus insectopalo structural_bioinformatics
  • The structure of Ras protein: a model for a universal molecular switch
    Trends in Biochemical Sciences, Vol. 16 (1991), pp. 382-387.
    by Alfred Wittinghofer, Emil F Pal
    posted to review ras p-loop ntp g_proteins allosteric by barry to the group Bioinformatics on 2007-01-16 20:13:08 as ** along with 1 group structural_bioinformatics
  • Ran's C-terminal, basic patch, and nucleotide exchange mechanisms in light of a canonical structure for Rab, Rho, Ras, and Ran GTPases.
    Genome Res, Vol. 13, No. 4. (April 2003), pp. 673-692.
    by AF Neuwald, N Kannan, A Poleksic, N Hata, JS Liu
    posted to allosteric bioinf_methods contacts core_residues g_proteins ntpases p-loop protein_design protein_dynamics protein_evolution protein_sequence protein_structure by barry to the group Bioinformatics on 2006-01-07 03:57:13 as ***** along with 1 group structural_bioinformatics
  • Mechanism of the receptor-catalyzed activation of heterotrimeric G proteins
    Nature Structural & Molecular Biology, Vol. 13, No. 9. (06 August 2006), pp. 772-777.
    by William M Oldham, Ned Van Eps, Anita M Preininger, Wayne L Hubbell, Heidi E Hamm
    posted to protein_structure p-loop g_proteins by barry to the group Bioinformatics on 2007-05-18 03:01:32 as ** along with 2 people and 2 groups gcaltabiano cen4ik structural_bioinformatics LabCompMed
  • Site-Directed Mutagenesis, Kinetic, and Spectroscopic Studies of the P-Loop Residues in a Low Molecular Weight Protein Tyrosine Phosphatase
    Biochemistry, Vol. 35, No. 42. (22 October 1996), pp. 13609-13617.
    by B Evans, PA Tishmack, C Pokalsky, M Zhang, RL Van Etten
    posted to kinetics mutagenesis p-loop ptp by dkoveal on 2008-08-13 15:46:19 as **
  • High resolution crystal structures of human Rab4a in its active and inactive conformations
    FEBS Letters, Vol. 579, No. 13. (23 May 2005), pp. 2821-2829.
    by Silke K Huber, Axel J Scheidig
    posted to rab protein_structure p-loop g_proteins by barry on 2008-09-15 19:46:32 as *
  • On helicases and other motor proteins
    Current Opinion in Structural Biology, Vol. 18, No. 2. (April 2008), pp. 243-257.
    by Eric J Enemark, Leemor Joshua-Tor
    posted to review p-loop molecular_motors helicases by barry on 2008-10-02 19:40:39 as ** along with 2 people aip Iliak
  • The mammalian Rab family of small GTPases: definition of family and subfamily sequence motifs suggests a mechanism for functional specificity in the Ras superfamily.
    J Mol Biol, Vol. 301, No. 4. (25 August 2000), pp. 1077-1087.
    by JB Pereira-Leal, MC Seabra
    posted to rab protein_structure protein_sequence p-loop g_proteins by barry on 2008-09-15 19:49:36 as ** along with 1 person jcsanchez
  • GTPases: multifunctional molecular switches regulating vesicular traffic.
    Annu Rev Biochem, Vol. 63 (1994), pp. 949-990.
    by C Nuoffer, WE Balch
    posted to ntpases p-loop review by barry on 2007-11-08 18:44:54 as **
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