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Tag interactions [376 articles]

Recent papers classified by the tag interactions.
  • Moment-based prediction of DNA-binding proteins.
    J Mol Biol, Vol. 341, No. 1. (30 July 2004), pp. 65-71.
    by S Ahmad, A Sarai
    posted to interactions protein-dna by ziquje on 2005-05-16 16:45:05 as ***** along with 1 person kaarsinogen
  • Simulations of nucleic acids and their complexes.
    Acc Chem Res, Vol. 35, No. 6. (June 2002), pp. 350-357.
    by E Giudice, R Lavery
    posted to interactions protein-dna by ziquje on 2005-05-16 16:40:30 as ***** along with 2 people ffranca xingyuan
  • Selection of DNA binding sites by regulatory proteins. Statistical-mechanical theory and application to operators and promoters.
    J Mol Biol, Vol. 193, No. 4. (20 February 1987), pp. 723-750.
    by OG Berg, PH von Hippel
    posted to protein interactions by zambujo on 2008-04-29 14:02:35 as **** along with 7 people and 2 groups brant jjray indigoviolet lusk discreteonyxorb cisevol Ema EisenLab cis-regulatory-evolution
  • A Bayesian networks approach for predicting protein-protein interactions from genomic data.
    Science, Vol. 302, No. 5644. (17 October 2003), pp. 449-453.
    by R Jansen, H Yu, D Greenbaum, Y Kluger, NJ Krogan, S Chung, A Emili, M Snyder, JF Greenblatt, M Gerstein
    posted to interactions of prediction protein-protein by yuval on 2005-12-06 20:41:07 as ** along with 18 people and 2 groups frohike carlk lfriedl balajis opheliav wnpx nickluscombe ruvido raiyar massivemayhem kdang dbgrant nedwards karfunkel Evangelia shung phoenixzxl penpen926 kdl EBI-regulation
  • Model of mobile agents for sexual interactions networks
    (19 Aug 2005)
    by MC Gonzalez, PG Lind, HJ Herrmann
    posted to agents dtl eni enidtl interactions mobile multiagent networks pysics sexual social by yish on 2006-03-13 11:48:15 as ** along with 1 person and 4 groups dumpa mathgamespatterns dtl vds-arg eni
  • Cooperative interaction between hepatocyte nuclear factor 4 alpha and GATA transcription factors regulates ATP-binding cassette sterol transporters ABCG5 and ABCG8.
    Mol Cell Biol, Vol. 27, No. 12. (June 2007), pp. 4248-4260.
    by K Sumi, T Tanaka, A Uchida, K Magoori, Y Urashima, R Ohashi, H Ohguchi, M Okamura, H Kudo, K Daigo, T Maejima, N Kojima, I Sakakibara, S Jiang, G Hasegawa, I Kim, TF Osborne, M Naito, FJ Gonzalez, T Hamakubo, T Kodama, J Sakai
    posted to hnf4 interactions modulation by yevishere on 2008-01-03 23:22:00 as **
  • Functional interaction of hepatic nuclear factor-4 and peroxisome proliferator-activated receptor-gamma coactivator 1alpha in CYP7A1 regulation is inhibited by a key lipogenic activator, sterol regulatory element-binding protein-1c.
    Mol Endocrinol, Vol. 21, No. 11. (November 2007), pp. 2698-2712.
    by B Ponugoti, S Fang, JK Kemper
    posted to hnf4 interactions targets by yevishere on 2008-01-02 23:47:19 as **
  • Rifampicin induction of CYP3A4 requires pregnane X receptor cross talk with hepatocyte nuclear factor 4alpha and coactivators, and suppression of small heterodimer partner gene expression.
    Drug Metab Dispos, Vol. 34, No. 5. (May 2006), pp. 756-764.
    by T Li, JY Chiang
    posted to hnf4 interactions targets by yevishere on 2008-01-02 23:38:02 as **
  • Nuclear Receptor Hepatocyte Nuclear Factor 4alpha1 Competes with Oncoprotein c-Myc for Control of the p21/WAF1 Promoter.
    Mol Endocrinol, Vol. 22, No. 1. (January 2008), pp. 78-90.
    by WW Hwang-Verslues, FM Sladek
    posted to hnf4 interactions targets by yevishere on 2008-01-02 23:33:38 as **
  • Yeast two-hybrid: so many interactions, (in) so little time...
    Biol Reprod, Vol. 58, No. 2. (February 1998), pp. 302-311.
    by KH Young
    posted to interactions protein two-hybrid yeast by yeastyboy on 2006-11-21 10:55:46 as read along with 1 person laurabailey
  • A protein interaction network for pluripotency of embryonic stem cells
    Nature
    by Jianlong Wang, Sridhar Rao, Jianlin Chu, Xiaohua Shen, Dana N Levasseur, Thorold W Theunissen, Stuart H Orkin
    posted to cells es interactions protein by yeastyboy on 2006-12-01 08:55:26 as ** along with 6 people and 2 groups kentsis marcius wnpx Ao_Li2007 iris_2001 tdmckee BioinfoCIPF SGU-CIPF
  • Genome-Wide Prediction of C. elegans Genetic Interactions
    Science, Vol. 311, No. 5766. (10 March 2006), pp. 1481-1484.
    by Weiwei Zhong, Paul W Sternberg
    posted to c elegans genome genome_alignment human_genome interactions by xwbcn on 2006-03-11 04:12:04 as *** along with 7 people and 2 groups carlk lfriedl indigoviolet nirfriedman patrycjam patrycja_missiuro mingzhi kdl EisenLab
  • In vivo imaging of MADS-box transcription factor interactions
    Journal of Experimental Botany, Vol. 57, No. 1. (January 2006), pp. 33-42.
    by Isabella A Tonaco, Jan W Borst, Sacco C de Vries, Gerco C Angenent, Richard G Immink
    posted to factor imaging in interactions mads-box of transcription vivo by xixibio on 2006-04-19 13:40:37 as **
  • The human disease network
    PNAS, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690.
    by Kwang-Il Goh, Michael E Cusick, David Valle, Barton Childs, Marc Vidal, Albert-Laszlo Barabasi
    posted to bioinformatics genomics interactions by xingxu on 2007-12-04 18:15:08 as ** along with 24 people and 8 groups yaredo shoshin carlk mingzhi Yanno jyuh aalibes cannin kuhn jfr yas balicea neveaire bundschu raiyar grahamc joepickrell leSyl henning dejori winterschlaefer naegele shikin nolodie GomezLab Biostatistics Computational-Genomics Bioinformatics Neuroscience steinmetzlab ic4 generif_paper
  • Modulated receptor interactions in bacterial transmembrane signaling
    Trends in Cell Biology, Vol. 14, No. 9. (September 2004), pp. 478-482.
    by Daniel J Webre, Peter M Wolanin, Jeffry B Stock
    posted to interactions microbiology receptor review signaling transmembrane by xingxu on 2008-02-21 22:58:45 as ** along with 1 person Pao-Yang
  • Estimating the size of the human interactome
    Proceedings of the National Academy of Sciences (12 May 2008), 0708078105.
    by Michael P Stumpf, Thomas Thorne, Eric de Silva, Ronald Stewart, Hyeong J An, Michael Lappe, Carsten Wiuf
    posted to network interactions bioinformatics by xingxu on 2008-05-19 21:09:29 as ** along with 20 people bpcusack dragonrez chad_davis Evangelia balicea marck paolomarcatili sanchezbuelna cabbagesofdoom mjoach jyuh chrissp100 zwang roys brianb friendpine Ema neils tmmurali phoenixzxl
  • Predicting disease genes using protein-protein interactions.
    J Med Genet, Vol. 43, No. 8. (August 2006), pp. 691-698.
    by M Oti, B Snel, MA Huynen, HG Brunner
    posted to network interactions bioinformatics by xingxu on 2008-06-26 04:42:39 as ** along with 4 people balicea bicko jiny svdate
  • Neurite Outgrowth Is Directed by Schwann Cell Alignment in the Absence of Other Guidance Cues
    Annals of Biomedical Engineering, Vol. 34, No. 1. (January 2006), pp. 161-168.
    by Deanna Thompson, Helen Buettner
    posted to cell interactions printed schwann by ucbckpw on 2006-07-18 10:15:01 as ***
  • PLANT SCIENCE: The Power of the Pyramid
    Science, Vol. 318, No. 5856. (7 December 2007), pp. 1561-1562.
    by William J Moar, Konasale J Anilkumar
    posted to - insect interactions plant by tomes16 on 2007-12-07 14:38:42 as ***
  • Interactions durables écologie et evolution du parasitisme
    (24 January 2002)
    by Claude Combes
    posted to book ecology evolution french interactions parasites parasitology by timothee on 2007-02-25 14:39:33 as read
  • Evolution, Interactions, and Biological Networks
    PLoS Biology, Vol. 5, No. 1. (1 January 2007), e11.
    by Joshua S Weitz, Philip N Benfey, Ned S Wingreen
    posted to evolution interactions network by timothee on 2007-01-19 20:35:53 as read along with 14 people and 1 group bpcusack skumagai eldan aalibes cmmorel balajis wnpx cerkut jhatrimatri josepe srfairclough hmk bootsy Ema contact-id
  • PIE: an online prediction system for protein-protein interactions from text
    Nucl. Acids Res. (28 May 2008), gkn281.
    by Sun Kim, Soo-Yong Shin, In-Hee Lee, Soo-Jin Kim, Ram Sriram, Byoung-Tak Zhang
    posted to textmining prediction interactions bioinformatics by tharris on 2008-05-30 21:27:58 as ** along with 3 people jyuh satre neils
  • Rational drug design via intrinsically disordered protein.
    Trends Biotechnol, Vol. 24, No. 10. (October 2006), pp. 435-442.
    by Y Cheng, T LeGall, CJ Oldfield, JP Mueller, YY Van, P Romero, MS Cortese, VN Uversky, AK Dunker
    posted to proteins protein-protein interactions drug disordered discovery by taianah on 2008-06-25 14:41:38 as ***** along with 1 person higueruelo
  • Detecting higher-order interactions among the spiking events in a group of neurons
    Biological Cybernetics, Vol. 73, No. 1. (7 July 1995), pp. 69-81.
    by L Martignon, H Von Hassein, S Grün, A Aertsen, G Palm
    posted to spike interactions graph assemblies by sylvain_chevallier on 2008-06-27 17:40:44 as read
  • Neuronal circuits of the neocortex.
    Annu Rev Neurosci, Vol. 27 (2004), pp. 419-451.
    by RJ Douglas, KA Martin
    posted to neurons interactions cortical circuit assembly by sylvain_chevallier on 2008-07-22 16:17:01 as read along with 3 people dcoates klouie fbaroni
  • Bose-Einstein Condensates in Time Dependent Traps
    Physical Review Letters, Vol. 77, No. 27. (30 December 1996), 5315.
    by Y Castin, R Dum
    posted to bec coherence expansion interactions phase-evolution by swhitlock on 2007-12-08 12:54:15 as ** along with 1 group Qugatopia
  • Evolution of a Bose-condensed gas under variations of the confining potential
    Physical Review A, Vol. 54, No. 3. (1996), R1753.
    by Yu Kagan, EL Surkov, GV Shlyapnikov
    posted to bec coherence expansion interactions phase-evolution by swhitlock on 2007-12-08 12:53:35 as *** along with 1 person and 1 group misha Qugatopia
  • Experimental study of the thermodynamics of an interacting trapped Bose-Einstein condensed gas
    Physical Review A (Atomic, Molecular, and Optical Physics), Vol. 70, No. 1. (2004)
    by F Gerbier, JH Thywissen, S Richard, M Hugbart, P Bouyer, A Aspect
    posted to bec bose-gas hartree-fock interactions by swhitlock on 2007-12-20 11:58:43 as ** along with 1 person and 1 group spreeuw Qugatopia
  • Bose–Einstein Condensation in a Harmonic Trap: Effect of Interactions on Tc
    Journal of Statistical Physics, Vol. 110, No. 3. (1 March 2003), pp. 903-910.
    by AJ Leggett
    posted to bec bose-gas interactions by swhitlock on 2007-11-25 18:15:36 as ** along with 1 group Qugatopia
  • Parasite ligand-host receptor interactions during invasion of erythrocytes by Plasmodium merozoites
    International Journal for Parasitology, Vol. 34, No. 13-14. (December 2004), pp. 1413-1429.
    by Deepak Gaur, Ghislaine DC Mayer, Louis H Miller
    posted to host-pathogen interactions plasmodium by svdate on 2007-12-04 16:14:58 as ***
  • Differences among the three major strains of Toxoplasma gondii and their specific interactions with the infected host
    Trends in Parasitology, Vol. 21, No. 10. (October 2005), pp. 476-481.
    by Jeroen P Saeij, Jon P Boyle, John C Boothroyd
    posted to apicomplexa host-pathogen interactions toxoplasma by svdate on 2007-12-04 16:13:47 as ***
  • Discovery of uncharacterized cellular systems by genome-wide analysis of functional linkages.
    Nat Biotechnol, Vol. 21, No. 9. (September 2003), pp. 1055-1062.
    by SV Date, EM Marcotte
    posted to bioinformatics biology computational interactions interactome networks protein-protein systems by svdate on 2007-12-04 15:46:17 as ***** along with 2 people tmmurali balajis
  • LGL: creating a map of protein function with an algorithm for visualizing very large biological networks.
    J Mol Biol, Vol. 340, No. 1. (25 June 2004), pp. 179-190.
    by AT Adai, SV Date, S Wieland, EM Marcotte
    posted to bioinformatics biology computational interactions interactome protein-protein software visualization by svdate on 2007-12-04 15:45:39 as ***** along with 3 people opheliav mmartin ganden
  • A probabilistic functional network of yeast genes.
    Science, Vol. 306, No. 5701. (26 November 2004), pp. 1555-1558.
    by I Lee, SV Date, AT Adai, EM Marcotte
    posted to bioinformatics biology computational interactions interactome networks by svdate on 2007-12-04 15:42:56 as ***** along with 14 people and 3 groups balicea kintoki roys ellakat irenas lfriedl ccots balajis nuke2005 eweaver opheliav nickluscombe reidy dbgrant dbk-lab kdl EBI-regulation
  • Computational modeling of the Plasmodium falciparum interactome reveals protein function on a genome-wide scale
    Genome Res., Vol. 16, No. 4. (1 April 2006), pp. 542-549.
    by Shailesh V Date, Christian J Stoeckert
    posted to bioinformatics biology computational interactions interactome malaria networks plasmodium protein-protein by svdate on 2007-12-04 15:39:39 as ***** along with 2 people Sharpshoot becarmson
  • Situating Simulation to Model Human Spatio-Temporal Interactions: An Example Using Crime Events
    Transactions in GIS, Vol. 11, No. 4. (August 2007), pp. 507-530.
    by Elizabeth R Groff
    posted to crime interactions modeling simulation space-time by suze on 2008-03-23 23:30:33 as **** along with 1 person ianturton
  • Modeling household interactions in daily in-home and out-of-home maintenance activity participation
    Transportation, Vol. 32, No. 5. (September 2005), pp. 523-544.
    by Sivaramakrishnan Srinivasan, Chandra Bhat
    posted to activity household interactions intra-household modeling transport travel by suze on 2008-03-23 22:39:43 as **
  • Modeling household activity-travel interactions as parallel constrained choices
    Transportation, Vol. 32, No. 5. (September 2005), pp. 449-471.
    by John Gliebe, Frank Koppelman
    posted to activity household interactions modeling transport travel by suze on 2008-03-23 22:38:24 as ***
  • Improvement in protein functional site prediction by distinguishing structural and functional constraints on protein family evolution using computational design.
    Nucleic Acids Res, Vol. 33, No. 18. (2005), pp. 5861-5867.
    by Gong Cheng, Bin Qian, Ram Samudrala, David Baker
    posted to energy functional interactions residues rosetta structural by sriram_s on 2006-03-24 23:51:27 as *** along with 6 people and 3 groups bicko Einat marcius alexg nickolay ladab structural_bioinformatics BioinfoCIPF SGU-CIPF
  • Evolutionarily Conserved Pathways of Energetic Connectivity in Protein Families
    Science, Vol. 286, No. 5438. (08 October 1999), pp. 295-299.
    by Steve W Lockless, Rama Ranganathan
    posted to conserved interactions long-range pathways by sriram_s on 2006-03-24 23:11:33 as *** along with 15 people and 5 groups stevanspringer Einat marcius eckart_bindewald analogAI dgront caporaso choonpeng Haggan rabio mottonen zambujo mingzhi bethbromley ca3295 structural_bioinformatics FAB-lab biomedical-nlp BioinfoCIPF SGU-CIPF
  • Strategic Response to Institutional Influences on Information Systems Outsourcing
    Organization Science, Vol. 8, No. 3. (1997), pp. 235-256.
    by Soon Ang, Larry L Cummings
    posted to 529 interactions logistic_regression outsourcing survey by skywalker on 2006-01-21 22:10:27 as ****
  • Protein–Protein Interactions More Conserved within Species than across Species
    PLoS Computational Biology, Vol. 2, No. 7. (1 July 2006), e79.
    by Sven Mika, Burkhard Rost
    posted to interactions proteinprotein by skhadar on 2007-07-25 06:53:31 as read along with 3 people and 2 groups chad_davis marcius dquest BioinfoCIPF SGU-CIPF
  • Prediction of functional sites by analysis of sequence and structure conservation.
    Protein Sci, Vol. 13, No. 4. (April 2004), pp. 884-892.
    by AR Panchenko, F Kondrashov, S Bryant
    posted to bioinformatics functional interaction interactions prediction sites by skhadar on 2007-08-17 07:49:55 as ** along with 4 people chrn sriram_s tanuja_rastogi Jporci
  • Vacancy in silicon: Hyperfine interactions from electron-nuclear double resonance measurements
    Physical Review B, Vol. 35, No. 4. (1 February 1987), 1566.
    by M Sprenger, SH Muller, EG Sieverts, CAJ Ammerlaan
    posted to endor hyperfine interactions silicon vacancies by sieeg on 2006-10-10 14:45:34 as read
  • Evolutionary predictions of binding surfaces and interactions.
    Curr Opin Struct Biol, Vol. 12, No. 1. (February 2002), pp. 21-27.
    by O Lichtarge, ME Sowa
    posted to binding conservation evolution interactions prediction protein surfaces by siebertm on 2007-05-22 14:39:15 as * along with 1 person nickolay
  • notes Effects of Perceived and Imagined Odors on Taste Detection
    Chem. Senses, Vol. 29, No. 3. (1 March 2004), pp. 199-208.
    by J Djordjevic, RJ Zatorre, M Jones-Gotman
    posted to congruency imagery interactions odor taste by serpar on 2006-10-06 07:50:05 as **
  • A Coalgebraic Description of Web Interactions
    Theoretical Computer Science (2003), pp. 271-283.
    by Daniela Cancila, Furio Honsell
    posted to semigroups semigroupoids semantic-web interactions coalgebroids coalgebras coalgebraicity coalgebraic behaviours automatons algebroids algebraic-semiotics algebraicity by Scis0000002 on 2008-06-01 10:24:43 as **
  • Project Description:
    by Higher C Structures
    posted to category-of-cobordisms category-of-interactions combination combinations-of-interactions combining higher-dimensional-category-theory interactions interferences interoperability manifolds multiverse superposition by Scis0000002 on 2007-07-15 18:00:54 as ** along with 1 person scis0000001
  • Quantum deformation of space-time symmetries and interactions
    Czechoslovak Journal of Physics, Vol. 47, No. 1. (28 January 1997), pp. 55-61.
    by Jerzy Lukierski, Peter C Stichel
    posted to deformation-theory interactions regularities space-time symmetries by Scis0000002 on 2007-08-25 14:44:47 as **
  • Fiber Bundle Gauge Theories and "Field's Dilemma"
    (19 May 2000)
    by Yair Guttmann, Holger Lyre
    posted to substrates standard-model realizability physical-theories physical-substrates physical-structures physical-models philosophy-of-physics mathematical-structures interactions gauge-theories formal-theories forces fields bundels by Scis0000002 on 2008-05-07 23:32:08 as **
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