registrieren | anmelden | FAQ      [?] 

Tag horizontal-gene-transfer [83 articles]

Recent papers classified by the tag horizontal-gene-transfer.
  • Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ.
    Genome Biol, Vol. 4, No. 9. (2003)
    by MV Omelchenko, KS Makarova, YI Wolf, IB Rogozin, EV Koonin
    posted to horizontal-gene-transfer by rabu on 2006-04-03 17:48:07 as ** along with 2 people jmeppley AaronDarling
  • Operon formation is driven by co-regulation and not by horizontal gene transfer.
    Genome Res, Vol. 15, No. 6. (June 2005), pp. 809-819.
    by MN Price, KH Huang, AP Arkin, EJ Alm
    posted to horizontal-gene-transfer operon regulation by rabu on 2006-04-03 17:51:14 as ** along with 1 person lingchong
  • Direct Visualization of Horizontal Gene Transfer
    Science, Vol. 319, No. 5869. (14 March 2008), pp. 1533-1536.
    by Ana Babic, Ariel B Lindner, Marin Vulic, Eric J Stewart, Miroslav Radman
    posted to evolution horizontal-gene-transfer by niallhaslam on 2008-04-22 10:23:58 as ** along with 4 people madhadron zwang melting dbikard
  • Detecting recombination from gene trees
    Mol Biol Evol, Vol. 15, No. 5. (1 May 1998), pp. 590-599.
    by John M Smith, NH Smith
    posted to hgt-detection horizontal-gene-transfer x-recombination-detection by jmeppley on 2006-03-22 18:36:07 as ** along with 4 people druvus bjorns AaronDarling Xavier
  • Recombination shapes the natural population structure of the hyperthermophilic archaeon Sulfolobus islandicus.
    Mol Biol Evol, Vol. 22, No. 12. (December 2005), pp. 2354-2361.
    by RJ Whitaker, DW Grogan, JW Taylor
    posted to hgt-archaea horizontal-gene-transfer microbial-populations population-genetics population-structure recombination sulfolobus x-recomb-evidence x-recomb-frequency z-paper-fer1-fer2-species by jmeppley on 2006-05-12 20:14:50 as read
  • Limitations of compositional approach to identifying horizontally transferred genes.
    J Mol Evol, Vol. 53, No. 3. (September 2001), pp. 244-250.
    by B Wang
    posted to hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-23 23:27:14 as ** along with 1 person karfunkel
  • Comparative analysis of a genome fragment of an uncultivated mesopelagic crenarchaeote reveals multiple horizontal gene transfers
    Environmental Microbiology, Vol. 6, No. 1. (2004), pp. 19-34.
    by Purificacion Lopez-Garcia, Celine Brochier, David Moreira, Francisco Rodriguez-Valera
    posted to delong-lab horizontal-gene-transfer marine-microbiology by jmeppley on 2007-09-19 02:24:51 as ** along with 1 person vrich
  • notes Discovery and classification of ecological diversity in the bacterial world: the role of DNA sequence data.
    Int J Syst Bacteriol, Vol. 47, No. 4. (October 1997), pp. 1145-1156.
    by T Palys, LK Nakamura, FM Cohan
    posted to clustering horizontal-gene-transfer microbial-species recombination x-coalescence-model z-paper-background z-paper-fer1-fer2-species by jmeppley on 2006-05-16 04:39:44 as read along with 1 person mcox
  • Intraspecific diversity of the 23S rRNA gene and the spacer region downstream in Escherichia coli
    Journal of Bacteriology, Vol. 181, No. 9. (1999), pp. 2703-2709.
    by A Anton, AJ Martinez-Murcia, F Rodriguez-Valera
    posted to hgt-mosaic-genome horizontal-gene-transfer recombination-rrna by jmeppley on 2006-03-22 18:04:23 as **
  • A Bayesian approach to discriminate between alternative DNA sequence segmentations.
    Bioinformatics, Vol. 18, No. 2. (February 2002), pp. 226-234.
    by D Husmeier, F Wright
    posted to hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-23 23:31:17 as **
  • RE-EVALUATING PROKARYOTIC SPECIES
    Nat Rev Micro, Vol. 3, No. 9. (2005), pp. 733-739.
    by Dirk Gevers, Frederick M Cohan, Jeffrey G Lawrence, Brian G Spratt, Tom Coenye, Edward J Feil, Erko Stackebrandt, Yves V de Peer, Peter Vandamme, Fabiano L Thompson, Jean Swings
    posted to horizontal-gene-transfer microbial-species x-microbial-species z-paper-background by jmeppley on 2006-07-12 00:02:42 as read along with 1 person karfunkel
  • Lateral gene transfer and the nature of bacterial innovation.
    Nature, Vol. 405, No. 6784. (18 May 2000), pp. 299-304.
    by H Ochman, JG Lawrence, EA Groisman
    posted to evolution horizontal-gene-transfer z-paper-background by jmeppley on 2006-05-12 20:05:34 as read along with 6 people and 2 groups cmzmasek ana gregdingle Ayest treangen manzanita structural_bioinformatics Bioinformatics
  • Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli
    Genome Biology, Vol. 7 (31 May 2006), R44.
    by Bob Mau, Jeremy D Glasner, Aaron E Darling, Nicole T Perna
    posted to escherichia-coli horizontal-gene-transfer recombination recombination-detection x-recomb-evidence z-paper-fer1-fer2-species by jmeppley on 2006-06-15 21:57:25 as ** along with 2 people AaronDarling vplagnol
  • Stepwise detection of recombination breakpoints in sequence alignments
    Bioinformatics, Vol. 21, No. 5. (01 March 2005), pp. 589-595.
    by Jinko Graham, Brad Mcneney, Francoise Seillier-Moiseiwitsch
    posted to hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-23 23:32:16 as ** along with 2 people AaronDarling treangen
  • Recombination within natural populations of pathogenic bacteria: Short-term empirical estimates and long-term phylogenetic consequences
    PNAS, Vol. 98, No. 1. (2 January 2001), pp. 182-187.
    by Edward J Feil, Edward C Holmes, Debra E Bessen, Man-Suen Chan, Nicholas P Day, Mark C Enright, Richard Goldstein, Derek W Hood, Awdhesh Kalia, Catrin E Moore, Jiaji Zhou, Brian G Spratt
    posted to horizontal-gene-transfer phylogenetics recombination by jmeppley on 2006-06-23 23:15:02 as ** along with 3 people vplagnol CharlesM mrthvzqz
  • Prokaryotic evolution in light of gene transfer.
    Mol Biol Evol, Vol. 19, No. 12. (December 2002), pp. 2226-2238.
    by JP Gogarten, WF Doolittle, JG Lawrence
    posted to horizontal-gene-transfer microbial-species phylogenetics speciation z-paper-background by jmeppley on 2006-03-23 22:04:53 as read along with 2 people AaronDarling Tingting
  • Lateral gene transfer: when will adolescence end?
    Mol Microbiol, Vol. 50, No. 3. (November 2003), pp. 739-749.
    by JG Lawrence, H Hendrickson
    posted to horizontal-gene-transfer by jmeppley on 2006-06-23 23:33:50 as ** along with 3 people AaronDarling treangen gcarbajosa
  • notes Horizontal gene transfer among microbial genomes: new insights from complete genome analysis
    Current Opinion in Genetics & Development, Vol. 10, No. 6. (1 December 2000), pp. 606-611.
    by Jonathan A Eisen
    posted to comparative-genomics hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-21 19:44:26 as **
  • Evaluation of Methods for Detecting Recombination from DNA Sequences: Empirical Data
    Mol Biol Evol, Vol. 19, No. 5. (1 May 2002), pp. 708-717.
    by David Posada
    posted to hgt-detection horizontal-gene-transfer x-recombination-detection by jmeppley on 2006-03-22 18:37:01 as read along with 2 people treangen dandaman
  • Importance of widespread gene transfer agent genes in [alpha]-proteobacteria
    Trends in Microbiology, Vol. 15, No. 2. (February 2007), pp. 54-62.
    by Andrew S Lang, Thomas J Beatty
    posted to microbiology horizontal-gene-transfer by jmeppley on 2007-02-07 20:59:13 as **
  • The Ins and Outs of DNA Transfer in Bacteria
    Science, Vol. 310, No. 5753. (2 December 2005), pp. 1456-1460.
    by Ines Chen, Peter J Christie, David Dubnau
    posted to horizontal-gene-transfer molecular-mechanismms by jmeppley on 2005-12-02 23:50:24 as * along with 4 people and 1 group dayjm Ayest treangen vwchan beta
  • notes DNA Sequence Similarity Requirements for Interspecific Recombination in Bacillus
    Genetics, Vol. 153, No. 4. (1 December 1999), pp. 1525-1533.
    by Jacek Majewski, Frederick M Cohan
    posted to bacillus horizontal-gene-transfer recombination recombination-divergence x-recomb-frequency z-paper-background z-paper-fer1-fer2-species by jmeppley on 2006-05-01 22:35:35 as read
  • The Effects of Rare but Promiscuous Genetic Exchange on Evolutionary Divergence in Prokaryotes
    The American Naturalist, Vol. 143, No. 6. (1994), pp. 965-986.
    by Frederick M Cohan
    posted to horizontal-gene-transfer microbial-species x-coalescence-model z-paper-background z-paper-fer1-fer2-species z-paper-strainer by jmeppley on 2006-05-16 17:15:00 as read
  • notes Sexual isolation and speciation in bacteria.
    Genetica, Vol. 116, No. 2-3. (November 2002), pp. 359-370.
    by FM Cohan
    posted to horizontal-gene-transfer microbial-species speciation x-microbial-species z-paper-background z-paper-fer1-fer2-species by jmeppley on 2006-03-23 22:03:01 as read
  • Sequence type analysis and recombinational tests (START).
    Bioinformatics, Vol. 17, No. 12. (December 2001), pp. 1230-1231.
    by KA Jolley, EJ Feil, MS Chan, MC Maiden
    posted to hgt-detection hgt-detection-software horizontal-gene-transfer software by jmeppley on 2006-03-23 23:23:12 as ** along with 1 person druvus
  • Oh brother, where art thou? A Bayes factor test for recombination with uncertain heritage.
    Syst Biol, Vol. 51, No. 5. (October 2002), pp. 715-728.
    by MA Suchard, RE Weiss, KS Dorman, JS Sinsheimer
    posted to hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-23 23:29:01 as **
  • Minimally selected p and other tests for a single abrupt changepoint in a binary sequence.
    Biometrics, Vol. 55, No. 4. (December 1999), pp. 1044-1050.
    by AL Halpern
    posted to hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-23 23:30:51 as **
  • Sex and virulence in Escherichia coli: an evolutionary perspective
    Molecular Microbiology, Vol. 60, No. 5. (June 2006), pp. 1136-1151.
    by Thierry Wirth, Daniel Falush, Ruiting Lan, Frances Colles, Patience Mensa, Lothar H Wieler, Helge Karch, Peter R Reeves, Martin C Maiden, Howard Ochman, Mark Achtman
    posted to escherichia-coli evolution horizontal-gene-transfer microbial-genetics recombination z-paper-fer1-fer2-species by jmeppley on 2007-03-03 18:47:31 as ** along with 1 person Xavier
  • notes Studies on codon usage in Thermoplasma acidophilum and its possible implications on the occurrences of lateral gene transfer.
    J Basic Microbiol, Vol. 45, No. 5. (2005), pp. 344-354.
    by SK Gupta, T Banerjee, S Basak, K Sahu, S Sau, TC Ghosh
    posted to comparative-genomics hgt-archaea horizontal-gene-transfer x-recomb-evidence by jmeppley on 2006-05-12 20:12:26 as read
  • notes Gene transfer from a parasitic flowering plant to a fern.
    Proc Biol Sci, Vol. 272, No. 1578. (7 November 2005), pp. 2237-2242.
    by CC Davis, WR Anderson, KJ Wurdack
    posted to horizontal-gene-transfer host-parasite mitochondrial-dna by jmeppley on 2005-10-14 17:51:13 as **
  • notes The cobweb of life revealed by genome-scale estimates of horizontal gene transfer.
    PLoS Biol, Vol. 3, No. 10. (October 2005)
    by F Ge, LS Wang, J Kim
    posted to comparative-genomics hgt-detection horizontal-gene-transfer phylogenetics tree-of-life by jmeppley on 2006-03-21 19:39:24 as ** along with 2 people and 2 groups ana AaronDarling structural_bioinformatics Bioinformatics
  • A Bayesian model for detecting past recombination events in DNA multiple alignments.
    J Comput Biol, Vol. 7, No. 1-2. (r 2000), pp. 159-170.
    by G McGuire, F Wright, MJ Prentice
    posted to hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-23 23:28:19 as **
  • Barriers to horizontal gene transfer by natural transformation in soil bacteria.
    APMIS Suppl, Vol. 84 (1998), pp. 77-84.
    by KM Nielsen
    posted to evolution genomics horizontal-gene-transfer microorganism by jmeppley on 2005-09-01 21:05:46 as ***
  • MECHANISMS OF, AND BARRIERS TO, HORIZONTAL GENE TRANSFER BETWEEN BACTERIA
    Nat Rev Micro, Vol. 3, No. 9. (2005), pp. 711-721.
    by Christopher M Thomas, Kaare M Nielsen
    posted to horizontal-gene-transfer recombination-mechanism x-recomb-mechanism by jmeppley on 2006-03-21 21:19:56 as ** along with 2 people karfunkel jaidev92
  • Probabilistic divergence measures for detecting interspecies recombination.
    Bioinformatics, Vol. 17 Suppl 1 (2001)
    by D Husmeier, F Wright
    posted to hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-23 23:28:06 as **
  • A likelihood method for the detection of selection and recombination using nucleotide sequences.
    Mol Biol Evol, Vol. 14, No. 3. (March 1997), pp. 239-247.
    by NC Grassly, EC Holmes
    posted to hgt-detection hgt-mosaic-genome horizontal-gene-transfer x-recombination-detection by jmeppley on 2006-03-22 18:33:51 as *** along with 1 person AaronDarling
  • notes Horizontal Gene Transfer in Microbial Genome Evolution
    Theoretical Population Biology, Vol. 61, No. 4. (1 June 2002), pp. 489-495.
    by Ravi Jain, Maria C Rivera, Jonathan E Moore, James A Lake
    posted to evolution horizontal-gene-transfer phylogenetics by jmeppley on 2006-03-21 19:20:02 as ** along with 1 person evodeva
  • Rates of Spontaneous Mutation
    Genetics, Vol. 148, No. 4. (1 April 1998), pp. 1667-1686.
    by John W Drake, Brian Charlesworth, Deborah Charlesworth, James F Crow
    posted to horizontal-gene-transfer recombination recombination-divergence by jmeppley on 2006-05-01 22:38:20 as **
  • Horizontal gene transfer and phylogenetics
    Current Opinion in Microbiology, Vol. 6, No. 5. (October 2003), pp. 498-505.
    by Herve Philippe, Christophe J Douady
    posted to archaea classification comparative-genomics evolution genomics horizontal-gene-transfer microbial-genomics phylogenetics proteins sequence-alignment tree-of-life by jmeppley on 2005-10-04 23:44:45 as **
  • Insights into extreme thermoacidophily based on genome analysis of Picrophilus torridus and other thermoacidophilic archaea
    Journal of Biotechnology, Vol. 126, No. 1. (20 October 2006), pp. 3-10.
    by A Angelov, W Liebl
    posted to acidophile archaea extremophile genomics horizontal-gene-transfer by jmeppley on 2006-09-29 17:09:27 as **
  • notes Insights on biology and evolution from microbial genome sequencing
    Genome Res., Vol. 15, No. 12. (1 December 2005), pp. 1603-1610.
    by Claire M Fraser-Liggett
    posted to community-genomics comparative-genomics evolution genomics horizontal-gene-transfer microbial-diversity microbial-genomics by jmeppley on 2005-12-16 06:19:43 as read along with 2 people Retchless operon
  • notes Horizontal gene transfer among genomes: The complexity hypothesis
    PNAS, Vol. 96, No. 7. (30 March 1999), pp. 3801-3806.
    by Ravi Jain, Maria C Rivera, James A Lake
    posted to horizontal-gene-transfer by jmeppley on 2006-03-21 19:24:06 as ** along with 2 people operon marcio
  • Statistical methods of DNA sequence analysis: detection of intragenic recombination or gene conversion
    Mol Biol Evol, Vol. 2, No. 6. (1 November 1985), pp. 539-556.
    by Jc Stephens
    posted to hgt-detection horizontal-gene-transfer recombination x-recombination-detection by jmeppley on 2006-03-23 22:42:56 as *** along with 1 person AaronDarling
  • notes Detection of lateral gene transfer among microbial genomes
    Current Opinion in Genetics & Development, Vol. 11, No. 6. (1 December 2001), pp. 620-626.
    by Mark A Ragan
    posted to comparative-genomics hgt-detection horizontal-gene-transfer by jmeppley on 2006-03-21 19:53:47 as **
  • notes The effect of DNA sequence divergence on sexual isolation in Bacillus.
    Genetics, Vol. 134, No. 2. (June 1993), pp. 401-408.
    by MS Roberts, FM Cohan
    posted to hgt-mechanism horizontal-gene-transfer microbial-species recombination recombination-divergence z-paper-background z-paper-fer1-fer2-species by jmeppley on 2006-05-16 04:46:39 as read
  • The Log-Linear Relationship Between Sexual Isolation and Sequence Divergence in Bacillus Transformation is Robust
    Genetics, Vol. 140, No. 3. (1 July 1995), pp. 917-932.
    by P Zawadzki, MS Roberts, FM Cohan
    posted to bacillus horizontal-gene-transfer recombination recombination-divergence x-recomb-frequency z-paper-fer1-fer2-species by jmeppley on 2006-05-01 22:37:40 as read
  • Evolutionary Implications of the Frequent Horizontal Transfer of Mismatch Repair Genes
    Cell, Vol. 103, No. 5. (22 November 2000), pp. 711-721.
    by Erick Denamur, Guillaume Lecointre, Pierre Darlu, Olivier Tenaillon, Cecile Acquaviva, Chalom Sayada, Ivana Sunjevaric, Rodney Rothstein, Jacques Elion, Francois Taddei
    posted to horizontal-gene-transfer mismatch-repair by jmeppley on 2006-08-09 16:32:41 as **
  • notes Role of interspecies transfer of chromosomal genes in the evolution of penicillin resistance in pathogenic and commensal Neisseria species.
    J Mol Evol, Vol. 34, No. 2. (February 1992), pp. 115-125.
    by BG Spratt, LD Bowler, QY Zhang, J Zhou, JM Smith
    posted to hgt-mosaic-genome horizontal-gene-transfer by jmeppley on 2006-03-23 22:41:23 as **
  • notes Global divergence of microbial genome sequences mediated by propagating fronts.
    Proc Natl Acad Sci U S A, Vol. 102, No. 20. (17 May 2005), pp. 7332-7337.
    by K Vetsigian, N Goldenfeld
    posted to horizontal-gene-transfer recombination recombination-divergence z-paper-background by jmeppley on 2006-06-23 23:49:51 as read along with 1 person AaronDarling
  • Three R's of bacterial evolution: how replication, repair, and recombination frame the origin of species.
    Environ Mol Mutagen, Vol. 38, No. 2-3. (2001), pp. 248-260.
    by EW Brown, JE LeClerc, ML Kotewicz, TA Cebula
    posted to escherichia-coli horizontal-gene-transfer microbial-species phylogenetics recombination speciation x-microbial-species z-paper-fer1-fer2-species by jmeppley on 2006-03-23 21:28:54 as ***
    • Bemerkung: Sie können diese Seite wie folgt zitieren: http://www.citeulike.org/tag/horizontal-gene-transfer

    Result page: 1 2 Next RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.