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Tag histone [345 articles]

Recent papers classified by the tag histone.
  • Genome-wide approaches to studying chromatin modifications
    Nat Rev Genet, Vol. 9, No. 3. (March 2008), pp. 179-191.
    by Dustin E Schones, Keji Zhao
    posted to chromatin genome-wide histone methylation by zwang on 2008-02-19 01:11:44 as ** along with 7 people jyuh tmmurali dchughes vega cabbagezs idonaldson faion
  • Genomic analysis of estrogen cascade reveals histone variant H2A.Z associated with breast cancer progression
    Mol Syst Biol, Vol. 4 (15 April 2008)
    by Sujun Hua, Caleb B Kallen, Ruby Dhar, Maria T Baquero, Christopher E Mason, Beth A Russell, Parantu K Shah, Jiang Liu, Andrey Khramtsov, Maria S Tretiakova, Thomas N Krausz, Olufunmilayo I Olopade, David L Rimm, Kevin P White
    posted to histone genome-wide by zwang on 2008-06-13 12:18:55 as ** along with 1 person mclarenv
  • A Genome-wide RNA Interference Screen Reveals that Variant Histones Are Necessary for Replication-Dependent Histone Pre-mRNA Processing
    Molecular Cell, Vol. 28, No. 4. (30 November 2007), pp. 692-699.
    by Eric J Wagner, Brandon D Burch, Ashley C Godfrey, Harmony R Salzler, Robert J Duronio, William F Marzluff
    posted to genome histone rna by zwang on 2007-12-10 05:03:46 as *
  • High-Resolution Profiling of Histone Methylations in the Human Genome
    Cell, Vol. 129, No. 4. (18 May 2007), pp. 823-837.
    by Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Dustin E Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao
    posted to genome histone methylation by zwang on 2007-06-14 02:07:15 as ** along with 1 person epigenetics
  • Chromatin dynamics and the preservation of genetic information
    Nature, Vol. 447, No. 7147. (21 June 2007), pp. 951-958.
    by Jessica A Downs, Michel C Nussenzweig, Andre Nussenzweig
    posted to chromatin-remodeling-modification dna-damage histone review by zhlei on 2007-11-05 20:10:18 as **** along with 5 people and 2 groups Petersarkies dchughes cjeans epigenetics koichiy G4ID Genetics-of-Gambling
  • New Nomenclature for Chromatin-Modifying Enzymes
    Cell, Vol. 131, No. 4. (16 November 2007), pp. 633-636.
    by David C Allis, Shelley L Berger, Jacques Cote, Sharon Dent, Thomas Jenuwien, Tony Kouzarides, Lorraine Pillus, Danny Reinberg, Yang Shi, Ramin Shiekhattar, Ali Shilatifard, Jerry Workman, Yi Zhang
    posted to histone by zhlei on 2007-11-21 00:20:29 as **
  • The Histone H3 Lysine-27 Demethylase Jmjd3 Links Inflammation to Inhibition of Polycomb-Mediated Gene Silencing
    Cell, Vol. 130, No. 6. (21 September 2007), pp. 1083-1094.
    by Francesca De Santa, Maria G Totaro, Elena Prosperini, Samuele Notarbartolo, Giuseppe Testa, Gioacchino Natoli
    posted to demethylation histone methylation by zhlei on 2007-11-21 00:15:43 as **
  • H3K27 Demethylases, at Long Last
    Cell, Vol. 131, No. 1. (5 October 2007), pp. 29-32.
    by Tomek Swigut, Joanna Wysocka
    posted to demethylation histone methylation review by zhlei on 2007-11-21 00:12:20 as ****
  • Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks
    Nature, Vol. 432, No. 7015. (18 November 2004), pp. 406-411.
    by Yentram Huyen, Omar Zgheib, Ditullio, Vassilis G Gorgoulis, Panayotis Zacharatos, Tom J Petty, Emily A Sheston, Hestia S Mellert, Elena S Stavridi, Thanos D Halazonetis
    posted to 53bp1 crb2 dna-damage dsb h3k79 histone histone-modification methylation rad9 by zhlei on 2007-12-14 18:12:16 as ** along with 2 people DNAReplication elzodw
  • Histone deacetylases and cancer.
    Oncogene, Vol. 26, No. 37. (13 August 2007), pp. 5420-5432.
    by MA Glozak, E Seto
    posted to cancer deacetylation histone by zhlei on 2007-11-02 02:21:33 as ** along with 1 person jyuh
  • Chromatin structure and DNA double-strand break responses in cancer progression and therapy
    Oncogene, Vol. 26, No. 56. (0000), pp. 7765-7772.
    by JA Downs
    posted to cancer h2ax histone histone-modification review by zhlei on 2007-12-13 17:13:21 as **
  • SIRT6 is a histone H3 lysine 9 deacetylase that modulates telomeric chromatin
    Nature (12 March 2008)
    by Eriko Michishita, Ronald A Mccord, Elisabeth Berber, Mitomu Kioi, Hesed Padilla-Nash, Mara Damian, Peggie Cheung, Rika Kusumoto, Tiara LA Kawahara, Carl J Barrett, Howard Y Chang, Vilhelm A Bohr, Thomas Ried, Or Gozani, Katrin F Chua
    posted to telomere sirtuin sirt6 histone h3k9 acetylation by zhlei on 2008-05-01 23:19:25 as ** along with 1 person biomcgary
  • HST3 is regulated by MEC1-dependent proteolysis and controls the S phase checkpoint and sister chromatid cohesion by deacetylating histone H3 at lysine 56.
    J Biol Chem (30 October 2007)
    by Safia Thaminy, Benjamin Newcomb, Jessica Kim, Tonibelle Gatbonton, Eric Foss, Julian Simon, Antonio Bedalov
    posted to acetylation deacetylation h3k56 histone histone-modification phosphorylation sirt2 sirtuin yeast by zhlei on 2007-12-13 16:49:46 as **
  • RNF8 Transduces the DNA-Damage Signal via Histone Ubiquitylation and Checkpoint Protein Assembly.
    Cell, Vol. 131, No. 5. (30 November 2007), pp. 901-914.
    by MS Huen, R Grant, I Manke, K Minn, X Yu, MB Yaffe, J Chen
    posted to chromatin chromatin-remodeling-modification dna-damage h2ax histone phosphorylation rnf8 ubiquitin ubiquitination by zhlei on 2007-12-13 16:31:38 as read
  • Replacement by Drosophila melanogaster Protamines and Mst77F of Histones during Chromatin Condensation in Late Spermatids and Role of Sesame in the Removal of These Proteins from the Male Pronucleus.
    Mol Cell Biol, Vol. 25, No. 14. (July 2005), pp. 6165-6177.
    by S Jayaramaiah Raja, R Renkawitz-Pohl
    posted to histone protamine proteasome spermatogenesis by zhlei on 2005-07-03 00:45:33 as read
  • DNA packaging and organization in mammalian spermatozoa: comparison with somatic cells.
    Biol Reprod, Vol. 44, No. 4. (April 1991), pp. 569-574.
    by WS Ward, DS Coffey
    posted to histone protamine spermatogenesis by zhlei on 2005-07-21 19:42:28 as **
  • Deoxyribonucleic acid loop domain tertiary structure in mammalian spermatozoa.
    Biol Reprod, Vol. 48, No. 6. (June 1993), pp. 1193-1201.
    by WS Ward
    posted to histone protamine spermatogenesis by zhlei on 2005-07-21 19:40:52 as **
  • Global patterns of histone modifications
    Current Opinion in Genetics & Development, Vol. 17, No. 2. (April 2007), pp. 94-99.
    by Oliver J Rando
    posted to histone histone-modification review by zhlei on 2007-12-17 22:47:12 as **
  • Chromatin modifications and their function.
    Cell, Vol. 128, No. 4. (23 February 2007), pp. 693-705.
    by T Kouzarides
    posted to chromatin chromatin-remodeling-modification histone modification review by zhlei on 2007-11-21 21:11:31 as ** along with 1 person jyuh
  • Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin.
    Cell, Vol. 123, No. 2. (21 October 2005), pp. 233-248.
    by RM Raisner, PD Hartley, MD Meneghini, MZ Bao, CL Liu, SL Schreiber, OJ Rando, HD Madhani
    posted to acetylation chromatin histone histone-modification by zhlei on 2007-11-29 04:55:55 as **
  • Heterochromatin is refractory to gamma-H2AX modification in yeast and mammals
    J. Cell Biol., Vol. 178, No. 2. (16 July 2007), pp. 209-218.
    by Jung-Ae Kim, Michael Kruhlak, Farokh Dotiwala, Andre Nussenzweig, James E Haber
    posted to chromatin chromatin-remodeling-modification dna-damage h2a h2ax histone phosphorylation yeast by zhlei on 2007-12-19 20:35:32 as **
  • Acetylation of H2AZ Lys 14 is associated with genome-wide gene activity in yeast.
    Genes Dev, Vol. 20, No. 6. (15 March 2006), pp. 711-722.
    by CB Millar, F Xu, K Zhang, M Grunstein
    posted to chromatin histone histone-modification by zhlei on 2007-11-29 15:40:19 as **
  • Single-nucleosome mapping of histone modifications in S. cerevisiae.
    PLoS Biol, Vol. 3, No. 10. (October 2005)
    by CL Liu, T Kaplan, M Kim, S Buratowski, SL Schreiber, N Friedman, OJ Rando
    posted to chromatin chromatin-remodeling-modification histone histone-modification by zhlei on 2007-11-29 03:52:12 as ** along with 3 people and 1 group shantanu nucleosome olympos Chromatin
  • The role of histones in chromatin remodelling during mammalian spermiogenesis.
    Eur J Biochem, Vol. 271, No. 17. (September 2004), pp. 3459-3469.
    by J Govin, C Caron, C Lestrat, S Rousseaux, S Khochbin
    posted to germ-line histone spermatogenesis testis-specific by zhlei on 2005-01-20 18:43:00 as **
  • Male germline-specific histones in mouse and man.
    Cytogenet Genome Res, Vol. 105, No. 2-4. (2004), pp. 203-214.
    by D Churikov, IA Zalenskaya, AO Zalensky
    posted to germ-line histone spermatogenesis testis-specific by zhlei on 2005-01-20 18:42:28 as **
  • Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF
    Nature, Vol. 442, No. 7098. (21 May 2006), pp. 91-95.
    by Haitao Li, Serge Ilin, Wooikoon Wang, Elizabeth M Duncan, Joanna Wysocka, David C Allis, Dinshaw J Patel
    posted to chromatin chromatin-binding chromatin-remodeling-modification h3k4 histone histone-modification methylation phd by zhlei on 2007-12-19 19:58:06 as ** along with 1 person and 1 group kengg Plantandetc
  • A tale of histone modifications
    Genome Biology, Vol. 2, No. 4. (2001), pp. reviews0003.1-reviews0003.6.
    by Patrick Grant
    posted to acetylation histone methylation modification phosphorylation by zhlei on 2007-11-02 04:39:59 as **
  • The landscape of histone modifications across 1% of the human genome in five human cell lines
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 691-707.
    by Christoph M Koch, Robert M Andrews, Paul Flicek, Shane C Dillon, Ulas Karaoz, Gayle K Clelland, Sarah Wilcox, David M Beare, Joanna C Fowler, Phillippe Couttet, Keith D James, Gregory C Lefebvre, Alexander W Bruce, Oliver M Dovey, Peter D Ellis, Pawandeep Dhami, Cordelia F Langford, Zhiping Weng, Ewan Birney, Nigel P Carter, David Vetrie, Ian Dunham
    posted to histone epigenetics encode by xingxu on 2008-05-15 17:47:56 as ** along with 6 people and 1 group jyuh djkt olympos ghattem epigenetics maximilianh Bioinformatics
  • The Proteasome Regulatory Particle Alters the SAGA Coactivator to Enhance Its Interactions with Transcriptional Activators
    Cell, Vol. 123, No. 3. (4 November 2005), pp. 423-436.
    by Daeyoup Lee, Elena Ezhkova, Bing Li, Samantha G Pattenden, William P Tansey, Jerry L Workman
    posted to acetyltransferase activator coactivator degradation histone proteasome protein saga transcription by xico on 2005-12-27 19:33:49 as **** along with 1 person and 1 group zhlei WetBiology
  • DNA physical properties determine nucleosome occupancy from yeast to fly
    Nucl. Acids Res. (17 May 2008), gkn262.
    by Vincent Miele, Cedric Vaillant, Yves D'aubenton-Carafa, Claude Thermes, Thierry Grange
    posted to nucleosome histone epigenetic bioinformatics by vega on 2008-06-18 09:20:28 as ** along with 1 person aalibes
  • 3' Processing and termination of mouse histone transcripts synthesized in vitro by RNA polymerase II
    Nucl. Acids Res., Vol. 24, No. 19. (1 October 1996), pp. 3797-3805.
    by X Gu, WF Marzluff
    posted to transcription-termination histone epigenetic chromatin by vega on 2008-05-15 09:32:11 as **
  • Epigenetic profiling of multidrug-resistant human MCF-7 breast adenocarcinoma cells reveals novel hyper- and hypomethylated targets
    Mol Cancer Ther, Vol. 6, No. 3. (1 March 2007), pp. 1089-1098.
    by Vasyl' F Chekhun, Nataliya Y Lukyanova, Olga Kovalchuk, Volodymyr P Tryndyak, Igor P Pogribny
    posted to mcf-7 histone epigenetic by vega on 2008-04-24 06:16:12 as **
  • Genome-wide H3K9 histone acetylation profiles are altered in benzopyrene treated MCF7 breast cancer cells
    J. Biol. Chem. (7 December 2007), M707506200.
    by Bekim Sadikovic, Joseph Andrews, David Carter, John Robinson, David I Rodenhiser
    posted to histone epigenetic by vega on 2008-04-24 05:26:49 as ** along with 1 person epigenetics
  • Coordinated Changes in DNA Methylation and Histone Modifications Regulate Silencing/Derepression of Luteinizing Hormone Receptor Gene Transcription
    Mol. Cell. Biol., Vol. 25, No. 18. (15 September 2005), pp. 7929-7939.
    by Ying Zhang, Naheed Fatima, Maria L Dufau
    posted to histone epigenetic by vega on 2008-04-24 05:18:23 as **
  • Two strategies for gene regulation by promoter nucleosomes
    Genome Res. (30 April 2008), gr.076059.108.
    by Itay Tirosh, Naama Barkai
    posted to epigenetic nucleosome histone bioinformatics by vega on 2008-06-13 04:09:12 as *** along with 7 people dchughes aalibes djkt fpattyn emptyhb roys nklee
  • A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning
    Genome Res. (13 May 2008), gr.076463.108.
    by Anton Valouev, Jeffrey Ichikawa, Thaisan Tonthat, Jeremy Stuart, Swati Ranade, Heather Peckham, Kathy Zeng, Joel A Malek, Gina Costa, Kevin Mckernan, Arend Sidow, Andrew Fire, Steven M Johnson
    posted to histone epigenetic chromatin bioinformatics by vega on 2008-06-13 04:07:54 as ** along with 5 people and 1 group caseybrown aalibes Stew dpollard maximilianh RockmanLab
  • A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
    Genome Res. (12 June 2008), gr.078261.108.
    by Travis N Mavrich, Ilya P Ioshikhes, Bryan J Venters, Cizhong Jiang, Lynn P Tomsho, Ji Qi, Stephan C Schuster, Istvan Albert, Franklin B Pugh
    posted to histone epigenetic chromatin bioinformatics by vega on 2008-06-13 04:06:08 as *** along with 1 person aalibes
  • Translational and rotational settings of H2A.Z nucleosomes across the Saccharomycescerevisiae genome
    Nature, Vol. 446, No. 7135., pp. 572-576.
    by Istvan Albert, Travis N Mavrich, Lynn P Tomsho, Ji Qi, Sara J Zanton, Stephan C Schuster, Franklin B Pugh
    posted to nucleosome histone epigenetic chromatin bioinformatics by vega on 2008-06-18 09:56:38 as ** along with 2 people and 1 group cwbrown lusk EisenLab
  • Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation
    PLoS Biology, Vol. 6, No. 3. (1 March 2008), e65.
    by Sushma Shivaswamy, Akshay Bhinge, Yongjun Zhao, Steven Jones, Martin Hirst, Vishwanath R Iyer
    posted to nucleosome histone epigenetic chromatin bioinformatics by vega on 2008-06-18 09:40:47 as ** along with 2 people djkt lusk
  • ChIP-Seq Data Reveal Nucleosome Architecture of Human Promoters
    Cell, Vol. 131, No. 5. (30 November 2007), pp. 831-832.
    by Christoph D Schmid, Philipp Bucher
    posted to nucleosome histone chromatin bioinformatics by vega on 2008-06-18 09:31:20 as ** along with 1 person mikaelhuss
  • An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)
    Genome Res. (24 June 2008), gr.077479.108.
    by Vardhman Rakyan, Thomas Down, Natalie Thorne, Paul Flicek, Eugene Kulesha, Stefan Graf, Eleni Tomazou, Liselotte Backdahl, Nathan Johnson, Marils Herberth, Kevin Howe, David Jackson, Marcos Miretti, Heike Fiegler, John Marioni, Ewan Birney, Tim Hubbard, Nigel Carter, Simon Tavare, Stephan Beck
    posted to methylation histone chromatin chip bioinformatics by vega on 2008-06-30 15:15:46 as ** along with 1 person rschulz
  • An intact histone 3'-processing site is required for transcription termination in a mouse histone H2a gene.
    Molecular and cellular biology, Vol. 11, No. 1. (January 1991), pp. 497-509.
    by N Chodchoy, NB Pandey, WF Marzluff
    posted to transcription-termination histone epigenetic chromatin by vega on 2008-05-15 10:27:58 as **
  • Model-based deconvolution of genome-wide DNA binding.
    Bioinformatics (1 December 2007)
    by David J J Reiss, Marc T T Facciotti, Nitin S S Baliga
    posted to nucleosome histone bioinformatics by vega on 2008-06-18 09:25:24 as ** along with 5 people isimpson jyuh djkt idonaldson yevishere
  • Evolution of vertebrate chromosomal sperm proteins: implications for fertility and sperm competition.
    Soc Reprod Fertil Suppl, Vol. 65 (2007), pp. 63-79.
    by J Ausió, JM Eirín-López, LJ Frehlick
    posted to evolution fertility histone protamine sperm_competition tnp vertebrate by uz_labu_laimi on 2007-09-04 19:11:49 as **
  • Testis/sperm-specific histone 2B in the sperm of donors and subfertile patients: variability and relation to chromatin packaging.
    Hum Reprod, Vol. 22, No. 3. (March 2007), pp. 743-750.
    by S Singleton, A Zalensky, GF Doncel, M Morshedi, IA Zalenskaya
    posted to chromatin chromatin_packaging cma3 fertility histone histone_htsh2b htsh2b human by uz_labu_laimi on 2007-06-06 23:27:49 as **
  • Characterisation of a human sperm cell subpopulation marked by the presence of the TSH2B histone.
    Reprod Fertil Dev, Vol. 19, No. 2. (2007), pp. 392-397.
    by S Singleton, O Mudrak, M Morshedi, S Oehninger, I Zalenskaya, A Zalensky
    posted to decondensation histone histone_tsh2b human nucleus pronucleus sperm_nucleus spermatozoa tsh2b by uz_labu_laimi on 2007-06-06 23:14:55 as **
  • Chromatin remodelling and epigenetic features of germ cells
    Nature, Vol. 434, No. 7033. (31 March 2005), pp. 583-589.
    by Sarah Kimmins, Paolo Sassone-Corsi
    posted to chromatin chromatin_remodelling epigenetic female_germ_cells germ_cells histone male_germ_cells oocyte ovary review spermatogenesis testis by uz_labu_laimi on 2007-06-01 04:00:20 as *** along with 1 person imouthesmp
  • Differential histone modifications mark mouse imprinting control regions during spermatogenesis
    The EMBO Journal, Vol. aop, No. current. (25 January 2007)
    by Katia Delaval, Jerome Govin, Frederique Cerqueira, Sophie Rousseaux, Saadi Khochbin, Robert Feil
    posted to bh_journal_club br_journal_club epigenetics es_cells histone histone_modification imprinting line1 maternal_imprinting mouse paternal_imprinting spermatogenesis by uz_labu_laimi on 2007-07-13 20:56:39 as read
  • Histone arginine methylation regulates pluripotency in the early mouse embryo
    Nature, Vol. 445, No. 7124., pp. 214-218.
    by Maria-Elena Torres-Padilla, David-Emlyn Parfitt, Tony Kouzarides, Magdalena Zernicka-Goetz
    posted to early_embryo embryo histone histone_arginine_methylation mouse pluripotency by uz_labu_laimi on 2007-04-25 16:43:13 as ***
  • Hyperacetylation of histone H4 in rat testis spermatids.
    Exp Cell Res, Vol. 152, No. 1. (May 1984), pp. 91-97.
    by SR Grimes, N Henderson
    posted to h4 h4_hyperacetylation histone rat spermatid testis by uz_labu_laimi on 2007-05-31 23:34:46 as **
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