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Tag eukaryotic [31 articles]

Recent papers classified by the tag eukaryotic.
  • Phylogenomics reshuffles the eukaryotic supergroups.
    PLoS ONE, Vol. 2, No. 8. (2007)
    by F Burki, K Shalchian-Tabrizi, M Minge, A Skjaeveland, SI Nikolaev, KS Jakobsen, J Pawlowski
    posted to eukaryotic evolution phylogenetics by operon on 2008-02-02 19:05:45 as ** along with 2 people and 1 group cmzmasek jdelcampo Microbial-Ecology
  • Phylogenetic Reconstruction of Orthology, Paralogy, and Conserved Synteny for Dog and Human
    PLoS Computational Biology, Vol. 2, No. 9. (1 September 2006), e133.
    by Leo Goodstadt, Chris P Ponting
    posted to eukaryotic evolution genomics ortholog paralog phylogenetics synteny by operon on 2007-07-23 21:11:47 as ***** along with 1 person and 1 group indigoviolet EisenLab
  • Assessing performance of orthology detection strategies applied to eukaryotic genomes.
    PLoS ONE, Vol. 2 (2007)
    by F Chen, AJ Mackey, JK Vermunt, DS Roos
    posted to eukaryotic evolution optimization ortholog phylogenetics by operon on 2007-07-23 20:37:13 as ***** along with 8 people and 3 groups cerca natstreet icases rvosa indigoviolet stajich cjeans winterschlaefer EisenLab FAB-lab TNT
  • An engineered Escherichia coli tyrosyl-tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system.
    Proc Natl Acad Sci U S A, Vol. 99, No. 15. (23 July 2002), pp. 9715-9720.
    by D Kiga, K Sakamoto, K Kodama, T Kigawa, T Matsuda, T Yabuki, M Shirouzu, Y Harada, H Nakayama, K Takio, Y Hasegawa, Y Endo, I Hirao, S Yokoyama
    posted to acid amino cell-free eukaryotic expression germ protein unnatural wheat by Odi on 2006-05-29 13:38:07 as **
  • JASPAR: an open-access database for eukaryotic transcription factor binding profiles.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by A Sandelin, W Alkema, P Engström, WW Wasserman, B Lenhard
    posted to database eukaryotic jaspar by nklee on 2008-04-01 02:08:44 as read along with 4 people and 2 groups aalibes indigoviolet jguinney heliopais EisenLab Motif Discovery
  • Divergence of selenocysteine tRNA recognition by archaeal and eukaryotic O-phosphoseryl-tRNASec kinase
    Nucl. Acids Res., Vol. 36, No. 6. (1 April 2008), pp. 1871-1880.
    by Lynn R Sherrer, Joanne M Ho, Dieter Soll
    posted to archaea eukaryotic kinase selenocysteine trna by neils on 2008-04-04 00:19:36 as **
  • Terminal proteins of Streptomyces chromosome can target DNA into eukaryotic nuclei
    Nucl. Acids Res. (14 May 2008), gkm1170.
    by Hsiu-Hui Tsai, Chih-Hung Huang, Alan M Lin, Carton W Chen
    posted to protein targeting streptomyces scl nucleus eukaryotic by neils on 2008-05-15 04:29:13 as **
  • Eukaryotic protein synthesis inhibitors identified by comparison of cytotoxicity profiles
    RNA, Vol. 10, No. 3. (1 March 2004), pp. 528-543.
    by Jenny Chan, Shakila N Khan, Isabelle Harvey, William Merrick, Jerry Pelletier
    posted to eukaryotic by mlzmlz on 2008-05-10 06:32:21 as **
  • THE LA PROTEIN
    Annual Review of Biochemistry, Vol. 71, No. 1. (2002), pp. 375-403.
    by Sandra L Wolin, Tommy Cedervall
    posted to trna translation rna review protein mrnas la genetic eukaryotic data cell by jonathanjacobs on 2008-06-20 18:21:04 as read along with 1 group The La Autoantigen.
  • Downregulation of the essential Trypanosoma brucei La protein affects accumulation of elongator methionyl-tRNA
    Molecular and Biochemical Parasitology, Vol. 144, No. 1. (November 2005), pp. 104-108.
    by George K Arhin, Shuiyuan Shen, Iehsus F Perez, Christian Tschudi, Elisabetta Ullu
    posted to cerevisiae chaperone conserved cytoplasmic database degradation endonucleolytic eukaryotes eukaryotic evolution experimental function gene homologue human la methionylpretrna microarray molecular motif mrnas nuclear nuclease nucleolar oligou phosphoprotein pol polymerase polyuridine prerrna presl pretrnas protein protozoa ribonucleoprotein rna saccharomyces snorna snrna splicing transcription trna trypanosome by jonathanjacobs on 2008-04-08 19:59:38 as **
  • The Trypanosoma brucei La protein is a candidate poly(U) shield that impacts spliced leader RNA maturation and tRNA intron removal
    International Journal for Parasitology, Vol. 35, No. 4. (1 April 2005), pp. 359-366.
    by Silvie Foldynova-Trantirkova, Zdenek Paris, Nancy R Sturm, David A Campbell, Julius Lukes
    posted to eukaryotic gene intron la lethality methylation motif mrna nuclear nucleolar pathway polyu protein ribosome rna splicing transsplicing trnatyr trypanosoma vector viable yeast by jonathanjacobs on 2008-04-08 19:55:29 as ** along with 1 group The La Autoantigen.
  • The Origins of Eukaryotic Gene Structure
    Mol Biol Evol, Vol. 23, No. 2. (1 February 2006), pp. 450-468.
    by Michael Lynch
    posted to eukaryotic evolutionary gene structure by indigoviolet on 2006-03-01 01:38:30 as **** along with 22 people and 9 groups karbak stevanspringer dayjm Ayest tny xwbcn dchughes petecl penka mtagaya madhadron cmm brixtonmc zhangli msierk brettc web20student BioNica krishnaJCSG timflutre jwestbrook ArtemPankin EisenLab Computational_Systems_Biology Nie FAB-lab G4ID Bioinformatics_MDACC evo-devo King_Lab Genetics-of-Gambling
  • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.
    Nat Genet, Vol. 25, No. 1. (May 2000), pp. 25-29.
    by M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, AP Davis, K Dolinski, SS Dwight, JT Eppig, MA Harris, DP Hill, L Issel-Tarver, A Kasarskis, S Lewis, JC Matese, JE Richardson, M Ringwald, GM Rubin, G Sherlock
    posted to analysis animals biology cells communication computer databases dna eukaryotic factual genes humans metaphysics mice molecular networks sequence terminology by incovoma on 2007-07-13 13:45:22 as ** along with 32 people and 5 groups roys dgront marck carlk pablomendes CitoJam aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele kdl Bioinformatics EisenLab T_lab biomedical-nlp
  • Genetic evidence for the expression of ATP- and GTP-specific succinyl-CoA synthetases in multicellular eucaryotes.
    J Biol Chem, Vol. 273, No. 42. (16 October 1998), pp. 27580-27586.
    by JD Johnson, JG Mehus, K Tews, BI Milavetz, DO Lambeth
    posted to acid amino analysis animals cells cloning columbidae conformation data distribution dna eukaryotic evolution expressed homology humans ligases mice molecular phylogeny protein sequence species specificity succinate-coa swine tags tissue by incovoma on 2007-07-23 16:20:34 as **
  • Inparanoid: a comprehensive database of eukaryotic orthologs.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by KP O'Brien, M Remm, EL Sonnhammer
    posted to analysis animals cells cluster database databases eukaryotic genetic genomics homology humans inparanoid interface internet management mice rats sequence systems user-computer by incovoma on 2007-07-13 13:28:34 as ** along with 7 people and 1 group mdimmic tmmurali dragonrez indigoviolet tny bluto jandot EisenLab
  • Automatic clustering of orthologs and in-paralogs from pairwise species comparisons.
    J Mol Biol, Vol. 314, No. 5. (14 December 2001), pp. 1041-1052.
    by M Remm, CE Storm, EL Sonnhammer
    posted to algorithms analysis animals automation biology caenorhabditis cells cluster computational databases drosophila elegans eukaryotic evolution genetic genome genomics homology humans inparanoid melanogaster molecular phylogeny proteins sequence software species specificity by incovoma on 2007-07-13 13:27:11 as ** along with 9 people and 2 groups wiedehopf cerca tmmurali indigoviolet Sharpshoot jhc gurkanbebek bluto ninch EisenLab BioinfoCIPF
  • Representing GC variation along eukaryotic chromosomes
    Gene, Vol. 333 (26 May 2004), pp. 135-141.
    by Jan Paces, Radek Zika, Vaclav Paces, Adam Pavlicek, Oliver Clay, Giorgio Bernardi
    posted to 2004 algorithm bioinformatics eukaryotic genomics my software by hpaces on 2007-11-13 16:07:02 as read
  • Predicting Protein Function with Hierarchical Phylogenetic Profiles: The Gene3D Phylo-Tuner Method Applied to Eukaryotic Genomes
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e237.
    by Juan A Ranea, Corin Yeats, Alastair Grant, Christine A Orengo
    posted to 2007 algorithm eukaryotic function genome phylogeny prediction protein by hpaces on 2007-12-10 19:42:09 as ** along with 4 people eckart_bindewald skhadar zwang asddd
  • The Global Landscape of Sequence Diversity
    Genome Biology, Vol. 8 (08 November 2007), R238.
    by Jose M Peregrin-Alvarez, John Parkinson
    posted to 2007 bioinformatics eukaryotic genomics phylogeny by hpaces on 2007-11-13 15:16:58 as *** along with 4 people skhadar gpalidwor cjeans ale
  • Eukaryotic evolution, changes and challenges
    Nature, Vol. 440, No. 7084., pp. 623-630.
    by Martin T Embley, William Martin
    posted to eukaryotic eukaryotic-evolution evolution by dchughes to the group G4ID on 2006-06-01 11:53:06 as ** along with 3 people and 3 groups emilyhare cmm dandaman EisenLab FAB-lab Genetics-of-Gambling
  • GENOMICS: Sea Anemone Provides a New View of Animal Evolution
    Science, Vol. 317, No. 5834. (6 July 2007), 27.
    by Elizabeth Pennisi
    posted to genome-sequencing genome eukaryotic-evolution eukaryotic by dchughes to the group G4ID on 2007-07-06 10:53:09 as ** along with 1 person and 1 group angieju Genetics-of-Gambling
  • Genomics and the Irreducible Nature of Eukaryote Cells
    Science, Vol. 312, No. 5776. (19 May 2006), pp. 1011-1014.
    by CG Kurland, LJ Collins, D Penny
    posted to eukaryotic genome by dchughes to the group G4ID on 2006-05-19 12:01:37 as ** along with 7 people and 6 groups cmzmasek barry kuhn dayjm cmm azuma mattjb structural_bioinformatics Bioinformatics FAB-lab ComplexAdaptiveSystems DSTO-CAS Genetics-of-Gambling
  • The origin of eukaryotes: a reappraisal.
    Nat Rev Genet (12 April 2007)
    by Christian de Duve
    posted to eukaryotic-origin eukaryotic-evolution eukaryotic by dchughes to the group G4ID on 2007-04-24 16:17:34 as ** along with 2 people and 1 group aswin dandaman Genetics-of-Gambling
  • Evaluating Support for the Current Classification of Eukaryotic Diversity
    PLoS Genetics, Vol. 2, No. 12. (1 December 2006), e220.
    by Laura W Parfrey, Erika Barbero, Elyse Lasser, Micah Dunthorn, Debashish Bhattacharya, David J Patterson, Laura A Katz
    posted to phylogeny eukaryotic by emilyhare to the group EisenLab on 2007-01-17 03:46:15 as ** along with 1 person mblwhoi
  • Picobiliphytes: A Marine Picoplanktonic Algal Group with Unknown Affinities to Other Eukaryotes
    Science, Vol. 315, No. 5809. (12 January 2007), pp. 253-255.
    by Fabrice Not, Klaus Valentin, Khadidja Romari, Connie Lovejoy, Ramon Massana, Kerstin Tobe, Daniel Vaulot, Linda K Medlin
    posted to eukaryotic picoplankton by Fabnot on 2007-02-13 18:30:11 as ***** along with 1 person and 1 group jdelcampo Microbial-Ecology
  • Adapting Proteostasis for Disease Intervention
    Science, Vol. 319, No. 5865. (15 February 2008), pp. 916-919.
    by William E Balch, Richard I Morimoto, Andrew Dillin, Jeffery W Kelly
    posted to disease eukaryotic homeostasis intervention protein proteostasis structure by davidlott on 2008-02-25 18:53:45 as **
  • The early evolution of eukaryotes: a geological perspective
    Science, Vol. 256, No. 5057. (1 May 1992), pp. 622-627.
    by AH Knoll
    posted to eukaryotic evolution by cmzmasek on 2008-04-08 23:17:16 as **
  • Regulation of RNA Polymerase II Transcription by Sequence-Specific DNA Binding Factors
    Cell, Vol. 116, No. 2. (23 January 2004), pp. 247-257.
    by James T Kadonaga
    posted to eukaryotic review transcription by cassj on 2005-03-15 15:55:12 as ***
  • Stalled polymerases and transcriptional regulation
    Nature Genetics, Vol. 39, No. 12., pp. 1421-1422.
    by John W Tamkun
    posted to eukaryotic mrna polii polymerase stalled transcription by cassj on 2007-12-03 13:36:38 as *** along with 4 people dchughes cjeans emptyhb rschulz
  • Evidence for a Mediator of RNA Polymerase II Transcriptional Regulation Conserved from Yeast to Man
    Cell, Vol. 110, No. 2. (26 July 2002), pp. 143-151.
    by Muriel Boube, Laurent Joulia, David L Cribbs, Henri-Marc Bourbon
    posted to activation eukaryotic mediator transcription by cassj on 2005-03-15 16:01:32 as **
  • The untranslated regions of eukaryotic mRNAs: Structure, function, evolution and bioinformatic tools for their analysis
    Brief Bioinform, Vol. 1, No. 3. (1 January 2000), pp. 236-249.
    by Graziano Pesole, Giorgio Grillo, Alessandra Larizza, Sabino Liuni
    posted to utr tool structure mrna function evolution eukaryotic bioinformatic analysis by bertelsen on 2008-04-23 23:30:40 as ***
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