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Tag epigenomics [23 articles]

Recent papers classified by the tag epigenomics.
  • The epigenomics of cancer.
    Cell, Vol. 128, No. 4. (23 February 2007), pp. 683-692.
    by PA Jones, SB Baylin
    posted to cancer chromatin epigenetics epigenomics remodeling silencing transcription by skoch3 on 2008-03-31 16:41:04 as read along with 6 people and 1 group huiminC misonneh oelemento SeungjoonOh cerami srp33 Koch_Lab
  • DNA methylomes, histone codes and miRNAs: Tying it all together.
    The international journal of biochemistry & cell biology (13 September 2008)
    by Sònia Guil, Manel Esteller
    posted to mirna epigenomics by samgj on 2008-10-08 10:02:59 as **
  • THE HISTORY OF CANCER EPIGENETICS
    Nat Rev Cancer, Vol. 4, No. 2. (February 2004), pp. 143-153.
    by Andrew P Feinberg, Benjamin Tycko
    posted to epigenomics by olympos on 2006-12-20 21:43:54 as ** along with 1 person inesdesantiago
  • Profile of Histone Lysine Methylation across Transcribed Mammalian Chromatin
    Mol. Cell. Biol., Vol. 26, No. 24. (15 December 2006), pp. 9185-9195.
    by Christopher R Vakoc, Mira M Sachdeva, Hongxin Wang, Gerd A Blobel
    posted to epigenomics histone methylation by olympos on 2007-06-06 14:09:41 as **
  • Computational prediction of methylation status in human genomic sequences.
    Proc Natl Acad Sci U S A, Vol. 103, No. 28. (11 July 2006), pp. 10713-10716.
    by R Das, N Dimitrova, Z Xuan, RA Rollins, F Haghighi, JR Edwards, J Ju, TH Bestor, MQ Zhang
    posted to epigenomics methylation by olympos on 2007-03-21 22:05:47 as ** along with 2 people eckart_bindewald epigenetics
  • Predicting methylation status of CpG islands in the human brain.
    Bioinformatics, Vol. 22, No. 18. (15 September 2006), pp. 2204-2209.
    by F Fang, S Fan, X Zhang, MQ Zhang
    posted to epigenomics methylation by olympos on 2007-03-21 22:06:34 as **
  • Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
    Nature (01 July 2007)
    by Tarjei S Mikkelsen, Manching Ku, David B Jaffe, Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung Kim, Richard P Koche, William Lee, Eric Mendenhall, Aisling O’donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S Lander, Bradley E Bernstein
    posted to chromatin epigenomics by olympos on 2007-08-02 22:36:59 as ** along with 14 people and 1 group gdb jyuh brant dchughes vega kengg vplagnol epigenetics bioyang cabbagezs rschulz slevy03 jasonflannick inesdesantiago EisenLab
  • Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals.
    Nat Genet, Vol. 33 Suppl (March 2003), pp. 245-254.
    by R Jaenisch, A Bird
    posted to cpg epigenomics tez by olympos on 2007-11-05 03:07:12 as **
  • EPIGENOMICS: BEYOND CPG ISLANDS
    Nat Rev Genet, Vol. 5, No. 6. (June 2004), pp. 446-455.
    by Melissa J Fazzari, John M Greally
    posted to cpg epigenomics review by olympos on 2006-12-20 21:36:08 as ** along with 2 people rdiaz vega
  • An Integrative Genomic and Epigenomic Approach for the Study of Transcriptional Regulation
    PLoS ONE, Vol. 3, No. 3. (26 March 2008), e1882.
    by Maria E Figueroa, Mark Reimers, Reid F Thompson, Kenny Ye, Yushan Li, Rebecca R Selzer, Jakob Fridriksson, Elisabeth Paietta, Peter Wiernik, Roland D Green, John M Greally, Ari Melnick
    posted to epigenomics melnick by oelemento on 2008-07-06 01:20:11 as ** along with 1 person jyuh
  • notes An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)
    Genome Res. (24 June 2008), gr.077479.108.
    by Vardhman Rakyan, Thomas Down, Natalie Thorne, Paul Flicek, Eugene Kulesha, Stefan Graf, Eleni Tomazou, Liselotte Backdahl, Nathan Johnson, Marils Herberth, Kevin Howe, David Jackson, Marcos Miretti, Heike Fiegler, John Marioni, Ewan Birney, Tim Hubbard, Nigel Carter, Simon Tavare, Stephan Beck
    posted to methylation epigenomics by oelemento on 2008-10-10 23:45:22 as read along with 5 people iris42 huiminC rschulz vega niallhaslam
  • The potential role of epigenomic dysregulation in complex human disease
    Trends in Genetics, Vol. 23, No. 11. (November 2007), pp. 588-595.
    by Eli Hatchwell, John M Greally
    posted to epigenomics by oelemento on 2008-05-03 22:20:31 as ** along with 1 person jyuh
  • Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells
    Nature Genetics, Vol. 37, No. 8. (10 July 2005), pp. 853-862.
    by Michael Weber, Jonathan J Davies, David Wittig, Edward J Oakeley, Michael Haase, Wan L Lam, Dirk Schübeler
    posted to cpg_island epigenomics methylation by oelemento on 2008-07-11 05:35:55 as ** along with 5 people huiminC tabu epigenetics vmsr slevy03
  • Comprehensive high-throughput arrays for relative methylation (CHARM).
    Genome research, Vol. 18, No. 5. (May 2008), pp. 780-790.
    by RA Irizarry, C Ladd-Acosta, B Carvalho, H Wu, SA Brandenburg, JA Jeddeloh, B Wen, AP Feinberg
    posted to irizarry epigenomics by oelemento on 2008-09-13 00:27:31 as ** along with 3 people huiminC jyuh jfr
  • A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis
    Nature Biotechnology, Vol. 26, No. 7. (08 July 2008), pp. 779-785.
    by Thomas A Down, Vardhman K Rakyan, Daniel J Turner, Paul Flicek, Heng Li, Eugene Kulesha, Stefan Gräf, Nathan Johnson, Javier Herrero, Eleni M Tomazou, Natalie P Thorne, Liselotte Bäckdahl, Marlis Herberth, Kevin L Howe, David K Jackson, Marcos M Miretti, John C Marioni, Ewan Birney, Tim JP Hubbard, Richard Durbin, Simon Tavaré, Stephan Beck
    posted to epigenomics methodology methylation by oelemento on 2008-07-09 16:42:03 as ** along with 3 people bpcusack slevy03 jyuh
  • Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation.
    Nature genetics (22 June 2008)
    by Kristi Kerkel, Alexandra Spadola, Eric Yuan, Jolanta Kosek, Le Jiang, Eldad Hod, Kerry Li, Vundavalli V V Murty, Nicole Schupf, Eric Vilain, Mitzi Morris, Fatemeh Haghighi, Benjamin Tycko
    posted to epigenomics methylation by oelemento on 2008-06-28 20:07:24 as ** along with 3 people huiminC rschulz djkt
  • Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome.
    Proc Natl Acad Sci U S A, Vol. 99, No. 1. (8 January 2002), pp. 327-332.
    by JM Greally
    posted to epigenomics by oelemento on 2008-07-06 01:35:42 as ** along with 1 person N0131826
  • CpG island methylation in human lymphocytes is highly correlated with DNA sequence, repeats, and predicted DNA structure.
    PLoS Genet, Vol. 2, No. 3. (March 2006)
    by C Bock, M Paulsen, S Tierling, T Mikeska, T Lengauer, J Walter
    posted to cpg_island epigenomics methylation by oelemento on 2008-07-11 05:28:09 as ** along with 6 people huiminC kaarsinogen eckart_bindewald olympos epigenetics clearbluespring
  • Intra-individual change over time in DNA methylation with familial clustering.
    JAMA : the journal of the American Medical Association, Vol. 299, No. 24. (25 June 2008), pp. 2877-2883.
    by HT Bjornsson, MI Sigurdsson, MD Fallin, RA Irizarry, T Aspelund, H Cui, W Yu, MA Rongione, TJ Ekström, TB Harris, LJ Launer, G Eiriksdottir, MF Leppert, C Sapienza, V Gudnason, AP Feinberg
    posted to methylation epigenomics by oelemento on 2008-09-13 00:29:27 as ** along with 1 person misonneh
  • The emerging science of epigenomics.
    Hum Mol Genet, Vol. 15 Spec No 1 (15 April 2006)
    by PA Callinan, AP Feinberg
    posted to epigenetics epigenomics by dchughes to the group G4ID on 2006-07-05 10:08:05 as ** along with 1 person and 1 group epigenetics Genetics-of-Gambling
  • Non-genomic transgenerational inheritance of disease risk
    BioEssays, Vol. 29, No. 2. (2007), pp. 145-154.
    by Peter D Gluckman, Mark A Hanson, Alan S Beedle
    posted to epigenomics epigenetics by dchughes to the group G4ID on 2007-01-17 11:41:38 as ** along with 1 group Genetics-of-Gambling
  • Genomic biology: The epigenomic era opens
    Nature, Vol. 448, No. 7153. (01 August 2007), pp. 548-549.
    by Stephen B Baylin, Kornel E Schuebel
    posted to epigenetics epigenomics by dchughes on 2007-10-09 15:23:39 as ** along with 3 people and 1 group jyuh saru epigenetics Bioinformatics
  • Controlling elements are wild cards in the epigenomic deck.
    Proc Natl Acad Sci U S A (19 November 2007)
    by Jennifer E E Cropley, David I K I Martin
    posted to epigenomics retrotransposon by dchughes on 2007-11-29 13:30:48 as ** along with 2 people balicea sebastien_vigneau
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