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Tag chapter [214 articles]

Recent papers classified by the tag chapter.
  • Pulmonary Physiology (Lange Physiology)
    (09 January 2007)
    by Michael G Levitzky
    posted to chapter mechanics by wilvc on 2008-01-23 01:35:25 as **
  • notes Social anxiety disorder in primary care
    General Hospital Psychiatry, Vol. 27, No. 3. ( 2005), pp. 161-168.
    by Raz Gross, Mark Olfson, Marc J Gameroff, Steven Shea, Adriana Feder, Rafael Lantigua, Milton Fuentes, Myrna M Weissman
    posted to 2 anxiety chapter group research social by tanbob on 2006-12-15 20:13:55 as **** along with 1 person and 1 group craigtalbert Pediatric_dentistry_group
  • Structure-based assembly of protein complexes in yeast.
    Science, Vol. 303, No. 5666. (26 March 2004), pp. 2026-2029.
    by P Aloy, B Boettcher, H Ceulemans, C Leutwein, C Mellwig, S Fischer, AC Gavin, P Bork, G Superti-Furga, L Serrano, RB Russell
    posted to chapter ppi by ruvido on 2008-03-20 11:42:58 as ** along with 4 people chad_davis koller Evangelia mingzhi
  • Collective dynamics of 'small-world' networks.
    Nature, Vol. 393, No. 6684. (4 June 1998), pp. 440-442.
    by DJ Watts, SH Strogatz
    posted to chapter by ruvido on 2008-04-08 18:53:15 as ** along with 58 people and 12 groups ulmer jotwin livingthingdan iris_2001 teferet camster G_RAM kewms KAllendoerfer AdrianMiles mague alexisgallagher Rsavi zqshen shivaram cmmorel Shirakawa tolosoft nithya nygaard balicea dumpa matteodellamico yoh dullhunk voiklis eldaly ianturton merazzle maqbes muraken zono zeroknowledge choonpeng cerkut xinian mmartin king amac adriandefroment RafG radale jaspervoskuilen timflutre pbrandao sugaya rsantana cjeans fbaroni michaelmampaey rcrane ransombriggs suizan lpfernandes sbianco kb kaks stefanoallesina dbk-lab GraphVis UCD_SmallWorldGraphVis Semantic-Social-Networks microRNA Web2 Soslab CooperationStudies ColDyn contact-id ADMiRes 801
  • KEGG: kyoto encyclopedia of genes and genomes.
    Nucleic Acids Res, Vol. 28, No. 1. (1 January 2000), pp. 27-30.
    by M Kanehisa, S Goto
    posted to chapter database ppi by ruvido on 2008-04-10 15:32:02 as ** along with 8 people Evangelia dquest j3xucite fisherp koerner noby naegele katerinakal
  • Ten thousand interactions for the molecular biologist
    Nat Biotech, Vol. 22, No. 10. (October 2004), pp. 1317-1321.
    by Patrick Aloy, Robert B Russell
    posted to chapter homology ppi by ruvido on 2008-04-09 17:31:01 as ** along with 8 people and 2 groups baaden jwm bicko chad_davis dullhunk dgront drastic Evangelia Radiation_Damage Stressosome
  • BIND--The Biomolecular Interaction Network Database.
    Nucleic Acids Res, Vol. 29, No. 1. (1 January 2001), pp. 242-245.
    by GD Bader, I Donaldson, C Wolting, BF Ouellette, T Pawson, CW Hogue
    posted to chapter database ppi by ruvido on 2008-04-10 15:30:32 as ** along with 2 people wnpx blackbart
  • A comprehensive two-hybrid analysis to explore the yeast protein interactome.
    Proc Natl Acad Sci U S A, Vol. 98, No. 8. (10 April 2001), pp. 4569-4574.
    by T Ito, T Chiba, R Ozawa, M Yoshida, M Hattori, Y Sakaki
    posted to chapter ppi by ruvido on 2008-04-07 17:29:32 as ** along with 12 people and 2 groups adiel dragonrez okarsligil lfriedl chad_davis balajis nuke2005 kengg gcalda lpfernandes shikin hplatero kdl Bioinformatics
  • A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
    Nature, Vol. 403, No. 6770. (10 February 2000), pp. 623-627.
    by Peter Uetz, Loic Giot, Gerard Cagney, Traci A Mansfield, Richard S Judson, James R Knight, Daniel Lockshon, Vaibhav Narayan, Maithreyan Srinivasan, Pascale Pochart, Alia Qureshi-Emili, Ying Li, Brian Godwin, Diana Conover, Theodore Kalbfleisch, Govindan Vijayadamodar, Meijia Yang, Mark Johnston, Stanley Fields, Jonathan M Rothberg
    posted to chapter ppi by ruvido on 2008-04-07 17:28:41 as ** along with 12 people and 1 group dragonrez bicko shivaram lfriedl chad_davis j3xucite dyermd timflutre gcalda grahamc laughcry hplatero kdl
  • Lethality and centrality in protein networks
    Nature, Vol. 411, No. 6833. (3 May 2001), pp. 41-42.
    by H Jeong, SP Mason, AL Barabasi, ZN Oltvai
    posted to chapter ppi by ruvido on 2008-04-08 15:52:41 as ** along with 11 people and 3 groups iris_2001 kuhn cmmorel nickluscombe gurkanbebek jeremymiller timflutre gcalda grahamc lpfernandes Evangelia EBI-regulation GeschwindLab ParkinsonLab_at_MaRS
  • Scale-free networks from varying vertex intrinsic fitness.
    Phys Rev Lett, Vol. 89, No. 25. (16 December 2002)
    by G Caldarelli, A Capocci, P De Los Rios, MA Muñoz
    posted to chapter networks by ruvido on 2008-04-07 17:27:37 as ** along with 5 people and 4 groups camster korakot ChaTo pdelosri ltabourier Philosophy_of_Information dbk-lab Blog_and_Wiki_Research EPFL_SB_ITP_LBS
  • Potential artefacts in protein-interaction networks.
    FEBS Lett, Vol. 530, No. 1-3. (23 October 2002), pp. 253-254.
    by P Aloy, RB Russell
    posted to chapter ppi by ruvido on 2008-04-07 17:23:28 as ** along with 3 people chad_davis wnpx gurkanbebek
  • Protein interactions: two methods for assessment of the reliability of high throughput observations.
    Mol Cell Proteomics, Vol. 1, No. 5. (May 2002), pp. 349-356.
    by CM Deane, Ł Salwiński, I Xenarios, D Eisenberg
    posted to chapter ppi by ruvido on 2008-04-07 17:21:57 as ** along with 8 people and 1 group tmmurali lfriedl bluto henschel iris_2001 shikin cdeane Pao-Yang kdl
  • Proteome survey reveals modularity of the yeast cell machinery
    Nature (22 January 2006)
    by Anne-Claude Gavin, Patrick Aloy, Paola Grandi, Roland Krause, Markus Boesche, Martina Marzioch, Christina Rau, Lars J Jensen, Sonja Bastuck, Birgit Dümpelfeld, Angela Edelmann, Marie-Anne Heurtier, Verena Hoffman, Christian Hoefert, Karin Klein, Manuela Hudak, Anne-Marie Michon, Malgorzata Schelder, Markus Schirle, Marita Remor, Tatjana Rudi, Sean Hooper, Andreas Bauer, Tewis Bouwmeester, Georg Casari, Gerard Drewes, Gitte Neubauer, Jens M Rick, Bernhard Kuster, Peer Bork, Robert B Russell, Giulio Superti-Furga
    posted to chapter genome by ruvido on 2008-04-09 15:29:03 as ** along with 19 people and 10 groups Yanno ana Borelli lfriedl ccots jmeppley chad_davis balajis xico shantanu nirfriedman balabu dgront noano koller nicoleq lpfernandes phoenixzxl larsjuhljensen structural_bioinformatics kdl MathBio Biostatistics Bioinformatics microRNA Computational_Systems_Biology EvolutionaryComputation Computational-Neurobiology WetBiology
  • High-resolution protein-protein docking
    Current Opinion in Structural Biology, Vol. 16, No. 2. (April 2006), pp. 183-193.
    by Jeffrey J Gray
    posted to chapter docking ppi by ruvido on 2008-04-09 16:00:27 as ** along with 5 people aqeel jwm ima bluvsh1 cjeans
  • Inferring protein interactions from phylogenetic distance matrices.
    Bioinformatics, Vol. 19, No. 16. (1 November 2003), pp. 2039-2045.
    by J Gertz, G Elfond, A Shustrova, M Weisinger, M Pellegrini, S Cokus, B Rothschild
    posted to chapter genome by ruvido on 2008-04-09 14:55:50 as ** along with 3 people and 1 group lfriedl balajis wnpx kdl
  • Exploiting the co-evolution of interacting proteins to discover interaction specificity.
    J Mol Biol, Vol. 327, No. 1. (14 March 2003), pp. 273-284.
    by AK Ramani, EM Marcotte
    posted to chapter genome by ruvido on 2008-04-09 14:55:17 as ** along with 1 person balajis
  • From words to literature in structural proteomics.
    Nature, Vol. 422, No. 6928. (13 March 2003), pp. 216-225.
    by A Sali, R Glaeser, T Earnest, W Baumeister
    posted to chapter ppi review by ruvido on 2008-04-10 15:12:55 as ** along with 4 people bicko chad_davis dgront lpfernandes
  • Co-evolutionary analysis reveals insights into protein-protein interactions.
    J Mol Biol, Vol. 324, No. 1. (15 November 2002), pp. 177-192.
    by CS Goh, FE Cohen
    posted to chapter genome by ruvido on 2008-04-09 14:54:46 as ** along with 1 person bicko
  • Computational Prediction of Protein–Protein Interactions
    Molecular Biotechnology, Vol. 38, No. 1. (20 January 2008), pp. 1-17.
    by Lucy Skrabanek, Harpreet Saini, Gary Bader, Anton Enright
    posted to chapter genome by ruvido on 2008-04-09 15:47:40 as ** along with 1 person jyuh
  • Protein interaction maps for complete genomes based on gene fusion events.
    Nature, Vol. 402, No. 6757. (4 November 1999), pp. 86-90.
    by AJ Enright, I Iliopoulos, NC Kyrpides, CA Ouzounis
    posted to chapter gene_fusion ppi by ruvido on 2008-03-26 16:08:46 as ** along with 2 people balajis selrac
  • Solvation energy in protein folding and binding.
    Nature, Vol. 319, No. 6050. (2 1986), pp. 199-203.
    by D Eisenberg, AD McLachlan
    posted to chapter ppi solvation by ruvido on 2008-04-07 16:42:52 as ** along with 1 person ashaytan
  • The third dimension for protein interactions and complexes
    Trends in Biochemical Sciences, Vol. 27, No. 12. (1 December 2002), pp. 633-638.
    by Patrick Aloy, Robert B Russell
    posted to chapter ppi by ruvido on 2008-03-26 16:00:31 as **
  • Comparative assessment of large-scale data sets of protein-protein interactions.
    Nature, Vol. 417, No. 6887. (23 May 2002), pp. 399-403.
    by C von Mering, R Krause, B Snel, M Cornell, SG Oliver, S Fields, P Bork
    posted to chapter ppi by ruvido on 2008-03-26 15:59:04 as ** along with 18 people and 6 groups camster barry dragonrez bicko lfriedl chad_davis alexg j3xucite bundschu yeastyboy raiyar grahamc iris_2001 cmor shu Evangelia shikin Pao-Yang dbk-lab structural_bioinformatics kdl Bioinformatics generif_paper GeneGo
  • Gene family evolution: an in-depth theoretical and simulation analysis of non-linear birth-death-innovation models.
    BMC Evol Biol, Vol. 4 (9 September 2004)
    by GP Karev, YI Wolf, FS Berezovskaya, EV Koonin
    posted to chapter by ruvido on 2008-03-20 11:01:39 as ** along with 1 person knaseanka
  • Evidence for dynamically organized modularity in the yeast protein-protein interaction network
    Nature, Vol. 430, No. 6995. (01 July 2004), pp. 88-93.
    by Jing-Dong J Han, Nicolas Bertin, Tong Hao, Debra S Goldberg, Gabriel F Berriz, Lan V Zhang, Denis Dupuy, Albertha JM Walhout, Michael E Cusick, Frederick P Roth, Marc Vidal
    posted to chapter ppi by ruvido on 2008-03-20 10:26:08 as ** along with 17 people and 1 group dragonrez lfriedl balajis yoh j3xucite koller mikaelhuss gcalda grahamc iris_2001 lpfernandes winterschlaefer Evangelia cdeane shung phoenixzxl stefanoallesina kdl
  • Gene families: the taxonomy of protein paralogs and chimeras.
    Science, Vol. 278, No. 5338. (24 October 1997), pp. 609-614.
    by S Henikoff, EA Greene, S Pietrokovski, P Bork, TK Attwood, L Hood
    posted to chapter by ruvido on 2008-03-18 16:26:10 as ** along with 2 people and 1 group Einat svdate structural_bioinformatics
  • Comparative modeling for protein structure prediction.
    Curr Opin Struct Biol (27 February 2006)
    by Krzysztof Ginalski
    posted to chapter homology_modelling by ruvido on 2008-04-04 17:16:07 as ** along with 5 people BragilMassoud kuhn rabio schuylrp insectopalo
  • Structural systems biology: modelling protein interactions
    Nature Reviews Molecular Cell Biology, Vol. 7, No. 3., pp. 188-197.
    by Patrick Aloy, Robert B Russell
    posted to chapter network ppi protein-interactions review system-biology by ruvido on 2006-12-29 12:08:39 as ** along with 17 people and 3 groups chad_davis ana aalibes bicko xico dgront drastic choonpeng henschel massivemayhem cat_worth fishtank iris_2001 gvuister lpfernandes Evangelia andreas_foersch structural_bioinformatics Bioinformatics WetBiology
  • Emergence of scaling in random networks
    Science, Vol. 286, No. 5439. (15 October 1999), pp. 509-512.
    by AL Barabasi, R Albert
    posted to chapter by ruvido on 2008-04-08 17:29:59 as ** along with 19 people and 8 groups camster korakot ldfu KAllendoerfer aalibes ChaTo shivaram mbliemel alexg yish balicea matteodellamico yoh merazzle maqbes cerkut timflutre boila koles Philosophy_of_Information dbk-lab Blog_and_Wiki_Research mathgamespatterns dtl vds-arg eni contact-id
  • Predicting protein-protein interactions based only on sequences information
    PNAS, Vol. 104, No. 11. (13 March 2007), pp. 4337-4341.
    by Juwen Shen, Jian Zhang, Xiaomin Luo, Weiliang Zhu, Kunqian Yu, Kaixian Chen, Yixue Li, Hualiang Jiang
    posted to chapter ppi by ruvido on 2008-03-20 10:09:38 as ** along with 4 people and 1 group samjlord Dualsystems cjeans huyun110 moernerlab
  • A Bayesian networks approach for predicting protein-protein interactions from genomic data.
    Science, Vol. 302, No. 5644. (17 October 2003), pp. 449-453.
    by R Jansen, H Yu, D Greenbaum, Y Kluger, NJ Krogan, S Chung, A Emili, M Snyder, JF Greenblatt, M Gerstein
    posted to chapter ppi by ruvido on 2008-03-20 10:05:09 as ** along with 16 people and 2 groups lfriedl balajis opheliav yuval wnpx nickluscombe raiyar massivemayhem kdang dbgrant nedwards karfunkel Evangelia shung phoenixzxl penpen926 kdl EBI-regulation
  • Evolution by gene duplication: an update
    Trends in Ecology & Evolution, Vol. 18, No. 6. (June 2003), pp. 292-298.
    by Jianzhi Zhang
    posted to chapter by ruvido on 2008-03-18 16:20:48 as ** along with 1 person RamuAnandakrishnan
  • Multimeric threading-based prediction of protein-protein interactions on a genomic scale: application to the Saccharomyces cerevisiae proteome.
    Genome Res, Vol. 13, No. 6A. (June 2003), pp. 1146-1154.
    by L Lu, AK Arakaki, H Lu, J Skolnick
    posted to chapter ppi by ruvido on 2008-04-04 17:05:33 as ** along with 4 people and 1 group mdimmic lfriedl chad_davis cjeans kdl
  • MULTIPROSPECTOR: an algorithm for the prediction of protein-protein interactions by multimeric threading.
    Proteins, Vol. 49, No. 3. (15 November 2002), pp. 350-364.
    by L Lu, H Lu, J Skolnick
    posted to chapter ppi by ruvido on 2008-04-04 17:05:03 as ** along with 5 people and 5 groups ana bicko chad_davis marcius sangeetha structural_bioinformatics Bioinformatics insilicodrug BioinfoCIPF SGU-CIPF
  • A genomic perspective on protein families.
    Science, Vol. 278, No. 5338. (24 October 1997), pp. 631-637.
    by RL Tatusov, EV Koonin, DJ Lipman
    posted to chapter by ruvido on 2008-03-18 16:17:07 as ** along with 6 people bjorns balajis nuke2005 AaronDarling ninch Ema
  • Assigning protein functions by comparative genome analysis: protein phylogenetic profiles.
    Proc Natl Acad Sci U S A, Vol. 96, No. 8. (13 April 1999), pp. 4285-4288.
    by M Pellegrini, EM Marcotte, MJ Thompson, D Eisenberg, TO Yeates
    posted to chapter genome by ruvido on 2008-04-09 11:44:44 as ** along with 8 people and 1 group dragonrez bicko lfriedl balajis opheliav tny winterschlaefer shung kdl
  • Measuring genome evolution.
    Proc Natl Acad Sci U S A, Vol. 95, No. 11. (26 May 1998), pp. 5849-5856.
    by MA Huynen, P Bork
    posted to chapter genome by ruvido on 2008-04-09 11:42:44 as ** along with 4 people ziquje greger_halltorp operon kaarsinogen
  • The relationship between sequence and interaction divergence in proteins.
    J Mol Biol, Vol. 332, No. 5. (3 October 2003), pp. 989-998.
    by P Aloy, H Ceulemans, A Stark, RB Russell
    posted to chapter ppi by ruvido on 2008-04-04 17:01:20 as ** along with 5 people karbak bicko chad_davis drastic RebeccaHamer
  • Computational methods for the prediction of protein interactions
    Current Opinion in Structural Biology, Vol. 12, No. 3. (1 June 2002), pp. 368-373.
    by Alfonso Valencia, Florencio Pazos
    posted to chapter computational ppi review by ruvido on 2008-03-27 11:18:53 as ** along with 2 people IbnBio selrac
  • InterPreTS: protein interaction prediction through tertiary structure.
    Bioinformatics, Vol. 19, No. 1. (January 2003), pp. 161-162.
    by P Aloy, RB Russell
    posted to chapter ppi by ruvido on 2008-04-04 16:58:26 as ** along with 5 people baaden bicko chad_davis henschel Pao-Yang
  • From The Cover: A simple physical model for scaling in protein-protein interaction networks
    PNAS, Vol. 103, No. 2. (10 January 2006), pp. 311-316.
    by Eric J Deeds, Orr Ashenberg, Eugene I Shakhnovich
    posted to chapter ppi by ruvido on 2008-03-18 16:07:20 as ** along with 4 people and 1 group shuns lfriedl gcalda iris_2001 kdl
  • Prediction of physical protein–protein interactions
    Physical Biology, Vol. 2, No. 2. (June 2005), S1.
    by András Szilágyi, Vera Grimm, Adrián K Arakaki, Jeffrey Skolnick
    posted to chapter ppi prediction by ruvido on 2008-03-19 10:25:46 as ** along with 1 person and 1 group lfriedl kdl
  • Computational redesign of protein-protein interaction specificity.
    Nat Struct Mol Biol, Vol. 11, No. 4. (April 2004), pp. 371-379.
    by T Kortemme, LA Joachimiak, AN Bullock, AD Schuler, BL Stoddard, D Baker
    posted to chapter ppi by ruvido on 2008-04-04 16:48:51 as ** along with 5 people lna jwm bicko cjeans tale
  • Comparative protein structure modeling of genes and genomes.
    Annu Rev Biophys Biomol Struct, Vol. 29 (2000), pp. 291-325.
    by MA Marti-Renom, AC Stuart, A Fiser, R Sanchez, F Melo, A Sali
    posted to chapter ppi by ruvido on 2008-04-04 16:47:47 as ** along with 10 people and 2 groups min013 aalibes nigham chad_davis ttjoseph marcius ffranca duartemolha dgront insectopalo BioinfoCIPF SGU-CIPF
  • A structural perspective on protein-protein interactions.
    Curr Opin Struct Biol, Vol. 14, No. 3. (June 2004), pp. 313-324.
    by RB Russell, F Alber, P Aloy, FP Davis, D Korkin, M Pichaud, M Topf, A Sali
    posted to chapter ppi review by ruvido on 2008-03-26 17:25:09 as ** along with 10 people and 1 group baaden bicko anita chad_davis dgront sriram_s cjeans Evangelia Pao-Yang marti structure-bii
  • Preferential attachment in the protein network evolution.
    Phys Rev Lett, Vol. 91, No. 13. (26 September 2003)
    by E Eisenberg, EY Levanon
    posted to chapter ppi by ruvido on 2008-04-08 16:22:53 as ** along with 3 people dragonrez gurkanbebek cjeans
  • Crystal Structure of Thermus aquaticus Core RNA Polymerase at 3.3 A Resolution
    Cell, Vol. 98, No. 6. (17 September 1999), pp. 811-824.
    by Gongyi Zhang, Elizabeth A Campbell, Leonid Minakhin, Catherine Richter, Konstantin Severinov, Seth A Darst
    posted to chapter ppi xray by ruvido on 2008-04-09 18:05:15 as **
  • The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
    Science, Vol. 289, No. 5481. (11 August 2000), pp. 905-920.
    by N Ban, P Nissen, J Hansen, PB Moore, TA Steitz
    posted to chapter ppi xray by ruvido on 2008-04-09 18:03:20 as ** along with 2 people P2324548 eckart_bindewald
  • Identification of protein-protein interfaces by decreased amide proton solvent accessibility.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 25. (8 December 1998), pp. 14705-14710.
    by JG Mandell, AM Falick, EA Komives
    posted to chapter nmr ppi by ruvido on 2008-04-09 18:00:44 as **
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