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Tag 12flies [11 articles]

Recent papers classified by the tag 12flies.
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  • Accurate gene-tree reconstruction by learning gene- and species-specific substitution rates across multiple complete genomes
    Genome Res. (7 November 2007), gr.7105007.
    by Matthew D Rasmussen, Manolis Kellis
    posted to 12flies drosophila gene_tree species_tree by stajich on 2007-11-12 17:38:39 as ** along with 3 people and 1 group druvus dpollard caseybrown EisenLab
  • Evolution of genes and genomes on the Drosophila phylogeny
    Nature, Vol. 450, No. 7167. (November 2007), pp. 203-218.
    posted to 12flies comparative_genomics drosophila genome_paper by stajich on 2007-12-16 01:04:03 as ** along with 23 people and 6 groups jbsaltz druvus pradiptaray pengchy operon tmmurali indigoviolet djkt timflutre zwang Garamonfok lp2 CharlesM hpaces caseybrown emptyhb urgi noor PetrovLab isimpson balicea cisevol hdopazo Bioinformatics EisenLab csb_journal_club_public Berkeley Mycology BergmanLab Drosophila-Genetics-Genomics-2008
  • Using multiple alignments to improve gene prediction.
    J Comput Biol, Vol. 13, No. 2. (March 2006), pp. 379-393.
    by SS Gross, MR Brent
    posted to prediction gene 12flies by indigoviolet to the group EisenLab on 2007-07-15 13:54:12 as ** along with 2 people druvus wenhan
  • Inparanoid: a comprehensive database of eukaryotic orthologs.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by KP O'Brien, M Remm, EL Sonnhammer
    posted to 12flies by indigoviolet to the group EisenLab on 2007-06-03 12:52:38 as ** along with 9 people and 1 group cgaugain tharris mdimmic tmmurali dragonrez tny bluto incovoma jandot C. elegans / WormBase
  • Automated generation of heuristics for biological sequence comparison
    BMC Bioinformatics, Vol. 6, No. 1. (2005)
    by Guy Slater, Ewan Birney
    posted to predictions gene 12flies by indigoviolet to the group EisenLab on 2007-07-15 14:09:07 as ** along with 8 people orzenil jmcq druvus waszak massivemayhem wenhan hpaces marti
  • GeneWise and Genomewise
    Genome Res., Vol. 14, No. 5. (1 May 2004), pp. 988-995.
    by Ewan Birney, Michele Clamp, Richard Durbin
    posted to predictions prediction genome gene computational comparative 12flies by indigoviolet to the group EisenLab on 2005-11-15 00:32:52 as *** along with 5 people and 1 group druvus azazello alexl wenhan Stew MBLAB
  • Reference based annotation with GeneMapper.
    Genome Biol, Vol. 7, No. 4. (5 April 2006)
    by Sourav Chatterji, Lior Pachter
    posted to predictions gene 12flies by indigoviolet to the group EisenLab on 2007-07-15 14:10:23 as ** along with 4 people and 1 group dpollard penka wenhan skumagai Nie
  • Basic local alignment search tool.
    J Mol Biol, Vol. 215, No. 3. (5 October 1990), pp. 403-410.
    by SF Altschul, W Gish, W Miller, EW Myers, DJ Lipman
    posted to 12flies by indigoviolet to the group EisenLab on 2007-07-15 14:19:11 as ** along with 45 people and 5 groups treangen pwais mmartin tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel Thaverkamp shung marti ashaytan benwei granujilla C. elegans / WormBase dbk-lab T_lab biomedical-nlp Microbial-Ecology
  • Evolutionary rate analyses of orthologs and paralogs from 12 Drosophila genomes
    Genome Res. (7 November 2007), gr.6249707.
    by Andreas Heger, Chris P Ponting
    posted to 12flies comparative homology by indigoviolet to the group EisenLab on 2007-11-07 23:43:05 as ** along with 6 people Garamonfok operon balicea nklee gjuggler hdopazo
  • Prediction of gene structure.
    J Mol Biol, Vol. 226, No. 1. (5 July 1992), pp. 141-157.
    by R Guigó, S Knudsen, N Drake, T Smith
    posted to prediction gene 12flies by indigoviolet to the group EisenLab on 2007-07-15 13:52:20 as ** along with 1 person wenhan
  • Gene finding in novel genomes.
    BMC Bioinformatics, Vol. 5 (14 May 2004)
    by I Korf
    posted to prediction gene 12flies by indigoviolet to the group EisenLab on 2007-07-15 13:51:00 as ** along with 5 people LeightonP wenhan GustavoLacerda cmzmasek alexl
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