Group: Bioinformatics - with tag acid [55 articles]

Proc Natl Acad Sci U S A, Vol. 102, No. 23. (2005), pp. 8210-5.

by K Shintomi, M Iwabuchi, H Saeki, K Ura, T Kishimoto, K Ohsumi

posted to govt female extracts disassembly data cycle chromatin chaperonesmetabolism cell assembly animals and amino acid genome-chromatin xenopusmetabolism support spermatozoametabolism sequence research proteinsgeneticsmetabolism proteins oocytesmetabolism nucleosomeschemistrymetabolism nuclear non-us molecular male histonesmetabolism by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:43 as along with 1 group ProkaryoteInterestGroup

Structure, Vol. 14, No. 3. (2006), pp. 457-68.

by N Tochio, T Umehara, S Koshiba, M Inoue, T Yabuki, M Aoki, E Seki, S Watanabe, Y Tomo, M Hanada, M Ikari, M Sato, T Terada, T Nagase, O Ohara, M Shirouzu, A Tanaka, T Kigawa, S Yokoyama

posted to specificity sequence research proteins protein oxidoreductases non-us n-demethylatingchemistrygenetics motifs molecular models histonesanalysismetabolism helix-turn-helix govt factorsanalysischemistry factors dna-binding disassembly data conformation chromatin assembly and amino acid genome-chromatin transcription time tertiary support substrate structure by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:41 as along with 1 group ProkaryoteInterestGroup

J Cell Sci, Vol. 117, No. Pt 6. (2004), pp. 815-25.

by M Rouleau, RA Aubin, GG Poirier

posted to genome-chromatin transcription support ribosemetabolism research proteins polymerases polyadp-ribose poly nucleusmetabolism nucleic non-us non-histonemetabolism nadmetabolism humans histonesmetabolism govt genetic dnametabolism disassemblyphysiology diphosphate conformation chromosomesmetabolism chromosomal chromatinmetabolism chromatin cell assembly apoptosisphysiology animals and adenosine acid by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:35 as along with 1 group ProkaryoteInterestGroup

J Biol Chem, Vol. 280, No. 14. (2005), pp. 13928-35.

by T Ichimura, S Watanabe, Y Sakamoto, T Aoto, N Fujita, M Nakao

posted to genome-chromatin transcription support sp1 silencing sequence research repressor regulation recombinant proteinsgeneticsmetabolism protein non-us multiprotein multigene molecular mice methyltransferasesgeneticsmetabolism humans heterochromatinmetabolism hela govt genetic gene fusion family factorsgeneticsmetabolism factorgeneticsmetabolism expression epigenesis dna-binding disassembly data complexes chromatin cells assembly animals and amino alignment acid by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:33 as along with 1 group ProkaryoteInterestGroup

Biochem Cell Biol, Vol. 83, No. 4. (2005), pp. 505-15.

by A Li, Eirin JM Lopez, J Ausio

posted to genome-chromatin transcription support sequence research repairphysiology phosphorylation non-us molecular instability humans homology histonesgeneticsmetabolism govt genomic geneticphysiology dna disassemblyphysiology data chromatin assembly animals and amino acid by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:28 as along with 1 group ProkaryoteInterestGroup

Hum Mol Genet, Vol. 12, No. 19. (2003), pp. 2491-501.

by DR Fitzpatrick, IM Carr, L Mclaren, JP Leek, P Wightman, K Williamson, P Gautier, N Mcgill, C Hayward, H Firth, AF Markham, JA Fantes, DT Bonthron

posted to genome-chromatin weight translocation transcription tertiary support study structure situ sequence research regulation reading proteins protein physical phylogeny palategenetics palatecytology pair open non-us motifs molecular mice mapping in hybridization humans human homology govt genetic genes gene frames fluorescence expression exons drosophila disassemblygenetics developmental data cultured comparative cleft chromosomes chromosome chromatin cells base assembly animals and amino acid 2 by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:18 as along with 1 group ProkaryoteInterestGroup

Genome Res, Vol. 14, No. 8. (Aug 2004), pp. 1617-1623.

by R Sorek, R Shemesh, Y Cohen, O Basechess, G Ast, R Shamir

posted to 0500 20040924 acid alternative animals biologymethods comparative computational databases exons expressed genetic genome human humans introns messengergenetics mice models nucleic rna sequence splicing study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as

Science, Vol. 301, No. 5631. (Jul 2003), pp. 376-379.

by S Kikuchi, K Satoh, T Nagata, N Kawagashira, K Doi, N Kishimoto, J Yazaki, M Ishikawa, H Yamada, H Ooka, I Hotta, K Kojima, T Namiki, E Ohneda, W Yahagi, K Suzuki, CJ Li, K Ohtsuki, T Shishiki, Y Otomo, K Murakami, Y Iida, S Sugano, T Fujimura, Y Suzuki, Y Tsunoda, T Kurosaki, T Kodama, H Masuda, M Kobayashi, Q Xie, M Lu, R Narikawa, A Sugiyama, K Mizuno, S Yokomizo, J Niikura, R Ikeda, J Ishibiki, M Kawamata, A Yoshimura, J Miura, T Kusumegi, M Oka, R Ryu, M Ueda, K Matsubara, J Kawai, P Carninci, J Adachi, K Aizawa, T Arakawa, S Fukuda, A Hara, W Hashizume, N Hayatsu, K Imotani, Y Ishii, M Itoh, I Kagawa, S Kondo, H Konno, A Miyazaki, N Osato, Y Ota, R Saito, D Sasaki, K Sato, K Shibata, A Shinagawa, T Shiraki, M Yoshino, Y Hayashizaki, A Yasunishi

posted to 0500 20030802 acid alternative amino analysis antisensegenetics biology cloning complementary computational data databases dna factorschemistrygenetics frames genes genetic genome govt homology molecular non-us nucleic open oryza plant protein proteinschemistrygeneticsphysiology reading research rna sativagenetics sequence splicing structure support tertiary transcription by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:00 as

Mamm Genome, Vol. 12, No. 9. (Sep 2001), pp. 673-677.

by S Kondo, A Shinagawa, T Saito, H Kiyosawa, I Yamanaka, K Aizawa, S Fukuda, A Hara, M Itoh, J Kawai, K Shibata, Y Hayashizaki

posted to 1001 20020105 acid algorithms analysis animals biologymethods comparative complementarygenetics computational data databases dna dnamethods exons factual genome govt homology human humans introns mice molecular non-us nucleic research sequence study support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:59 as

RNA, Vol. 10, No. 7. (Jul 2004), pp. 1005-1018.

by H Itoh, T Washio, M Tomita

posted to 0500 20040824 acid alternative animals base complementarygenetics conserved data dna drosophila evolution exonsgenetics govt humans intronsgenetics melanogastergenetics mice molecular non-us nucleic oryza regulatory research sativagenetics sequence sequences species specificity splicinggenetics support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:57 as

Nucleic Acids Res, Vol. 30, No. 17. (Sep 2002), pp. 3754-3766.

by Q Xu, B Modrek, C Lee

posted to 0400 20021126 acid alternative amino biologystatistics brainmetabolism cdc42 computational data dna-binding expressed expression factorsgenetics female gene geneticgenetics genome govt gtp-binding homology human humans isoformsgenetics library male molecular non-phs numerical profiling protein proteingenetics proteinsgenetics research sequence splicinggenetics support tags transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:54 as

J Comput Biol, Vol. 12, No. 6. (Jul 2005), pp. 882-893.

by Z Wu, RA Irizarry

posted to 0900 20051019 acid algorithms analysismethods and array comparative data expression gene genetic hybridization interpretation messengergenetics models nucleic of oligonucleotide processes profilingmethods reproducibility results rna sensitivity sequence specificity statistical stochastic study by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:52 as

Genes Dev, Vol. 17, No. 4. (Feb 2003), pp. 529-540.

by JL Rinn, G Euskirchen, P Bertone, R Martone, NM Luscombe, S Hartman, PM Harrison, FK Nelson, P Miller, M Gerstein, S Weissman, M Snyder

posted to 0500 20030328 22 a acid amino analysis animals array chromosomes conserved data databases female genetic govt human humans internet introns mice molecular non-us oligonucleotide pair phs placentaphysiology poly research sequence support transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:51 as

Science, Vol. 302, No. 5646. (Oct 2003), pp. 842-846.

by K Yamada, J Lim, JM Dale, H Chen, P Shinn, CJ Palm, AM Southwick, HC Wu, C Kim, M Nguyen, P Pham, R Cheuk, Karlin G Newmann, SX Liu, B Lam, H Sakano, T Wu, G Yu, M Miranda, HL Quach, M Tripp, CH Chang, JM Lee, M Toriumi, MM Chan, CC Tang, CS Onodera, JM Deng, K Akiyama, Y Ansari, T Arakawa, J Banh, F Banno, L Bowser, S Brooks, P Carninci, Q Chao, N Choy, A Enju, AD Goldsmith, M Gurjal, NF Hansen, Y Hayashizaki, Johnson C Hopson, VW Hsuan, K Iida, M Karnes, S Khan, E Koesema, J Ishida, PX Jiang, T Jones, J Kawai, A Kamiya, C Meyers, M Nakajima, M Narusaka, M Seki, T Sakurai, M Satou, R Tamse, M Vaysberg, EK Wallender, C Wong, Y Yamamura, S Yuan, K Shinozaki, RW Davis, A Theologis, JR Ecker

posted to 0500 20031210 acid analysis arabidopsisgenetics array biology chain chromosome chromosomes cloning complementarygenetics computational dna expressed expression frames gene genes genetic genome genomics govt hybridization intergenic mapping messengergenetics molecular non-phs non-us nucleic oligonucleotide open plant plantgenetics polymerase profiling reaction reading research reverse rna sequence support tags transcriptase transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:49 as

Science, Vol. 306, No. 5705. (Dec 2004), pp. 2242-2246.

by P Bertone, V Stolc, TE Royce, JS Rozowsky, AE Urban, X Zhu, JL Rinn, W Tongprasit, M Samanta, S Weissman, M Gerstein, M Snyder

posted to 0900 20050120 acid analysismethods animals array base biology chain complementary computational conserved cpg databases dna exons genetic genome govt homology human humans hybridization intergenic introns islands messengergenetics mice nucleic of oligonucleotide phs polymerase probes proteinschemistrygenetics reaction reproducibility research results reverse rna sequence support transcriptase transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:47 as

Nature, Vol. 420, No. 6915. (Dec 2002), pp. 563-573.

by Y Okazaki, M Furuno, T Kasukawa, J Adachi, H Bono, S Kondo, I Nikaido, N Osato, R Saito, H Suzuki, I Yamanaka, H Kiyosawa, K Yagi, Y Tomaru, Y Hasegawa, A Nogami, C Schonbach, T Gojobori, R Baldarelli, DP Hill, C Bult, DA Hume, J Quackenbush, LM Schriml, A Kanapin, H Matsuda, S Batalov, KW Beisel, JA Blake, D Bradt, V Brusic, C Chothia, LE Corbani, S Cousins, E Dalla, TA Dragani, CF Fletcher, A Forrest, KS Frazer, T Gaasterland, M Gariboldi, C Gissi, A Godzik, J Gough, S Grimmond, S Gustincich, N Hirokawa, IJ Jackson, ED Jarvis, A Kanai, H Kawaji, Y Kawasawa, RM Kedzierski, BL King, A Konagaya, IV Kurochkin, Y Lee, B Lenhard, PA Lyons, DR Maglott, L Maltais, L Marchionni, L Mckenzie, H Miki, T Nagashima, K Numata, T Okido, WJ Pavan, G Pertea, G Pesole, N Petrovsky, R Pillai, JU Pontius, D Qi, S Ramachandran, T Ravasi, JC Reed, DJ Reed, J Reid, BZ Ring, M Ringwald, A Sandelin, C Schneider, CA Semple, M Setou, K Shimada, R Sultana, Y Takenaka, MS Taylor, RD Teasdale, M Tomita, R Verardo, L Wagner, C Wahlestedt, Y Wang, Y Watanabe, C Wells, LG Wilming, Wynshaw A Boris, M Yanagisawa, I Yang, L Yang, Z Yuan, M Zavolan, Y Zhu, A Zimmer, P Carninci, N Hayatsu, Hirozane T Kishikawa, H Konno, M Nakamura, N Sakazume, K Sato, T Shiraki, K Waki, J Kawai, K Aizawa, T Arakawa, S Fukuda, A Hara, W Hashizume, K Imotani, Y Ishii, M Itoh, I Kagawa, A Miyazaki, K Sakai, D Sasaki, K Shibata, A Shinagawa, A Yasunishi, M Yoshino, R Waterston, ES Lander, J Rogers, E Birney, Y Hayashizaki

posted to 0400 20021228 acid alternative amino animals antisensegenetics chromosome chromosomes cloning complementarygenetics databases dna expressed genesgenetics genetic geneticgenetics genomicsmethods govt humans initiation mammaliangenetics mapping membrane messengeranalysisgenetics micegenetics molecular motifs non-us physical protein proteinsgenetics proteomechemistrygenetics research rna sequence site splicinggenetics structure support tags tertiary transcription untranslatedanalysisgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:45 as

Science, Vol. 309, No. 5740. (Sep 2005), pp. 1559-1563.

by P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, R Oyama, T Ravasi, B Lenhard, C Wells, R Kodzius, K Shimokawa, VB Bajic, SE Brenner, S Batalov, AR Forrest, M Zavolan, MJ Davis, LG Wilming, V Aidinis, JE Allen, Ambesi A Impiombato, R Apweiler, RN Aturaliya, TL Bailey, M Bansal, L Baxter, KW Beisel, T Bersano, H Bono, AM Chalk, KP Chiu, V Choudhary, A Christoffels, DR Clutterbuck, ML Crowe, E Dalla, BP Dalrymple, B de Bono, G Della Gatta, D di Bernardo, T Down, P Engstrom, M Fagiolini, G Faulkner, CF Fletcher, T Fukushima, M Furuno, S Futaki, M Gariboldi, Georgii P Hemming, TR Gingeras, T Gojobori, RE Green, S Gustincich, M Harbers, Y Hayashi, TK Hensch, N Hirokawa, D Hill, L Huminiecki, M Iacono, K Ikeo, A Iwama, T Ishikawa, M Jakt, A Kanapin, M Katoh, Y Kawasawa, J Kelso, H Kitamura, H Kitano, G Kollias, SP Krishnan, A Kruger, SK Kummerfeld, IV Kurochkin, LF Lareau, D Lazarevic, L Lipovich, J Liu, S Liuni, S Mcwilliam, Madan M Babu, M Madera, L Marchionni, H Matsuda, S Matsuzawa, H Miki, F Mignone, S Miyake, K Morris, Mottagui S Tabar, N Mulder, N Nakano, H Nakauchi, P Ng, R Nilsson, S Nishiguchi, S Nishikawa, F Nori, O Ohara, Y Okazaki, V Orlando, KC Pang, WJ Pavan, G Pavesi, G Pesole, N Petrovsky, S Piazza, J Reed, JF Reid, BZ Ring, M Ringwald, B Rost, Y Ruan, SL Salzberg, A Sandelin, C Schneider, C Schonbach, K Sekiguchi, CA Semple, S Seno, L Sessa, Y Sheng, Y Shibata, H Shimada, K Shimada, D Silva, B Sinclair, S Sperling, E Stupka, K Sugiura, R Sultana, Y Takenaka, K Taki, K Tammoja, SL Tan, S Tang, MS Taylor, J Tegner, SA Teichmann, HR Ueda, E van Nimwegen, R Verardo, CL Wei, K Yagi, H Yamanishi, E Zabarovsky, S Zhu, A Zimmer, W Hide, C Bult, SM Grimmond, RD Teasdale, ET Liu, V Brusic, J Quackenbush, C Wahlestedt, JS Mattick, DA Hume, C Kai, D Sasaki, Y Tomaru, S Fukuda, Kanamori M Katayama, M Suzuki, J Aoki, T Arakawa, J Iida, K Imamura, M Itoh, T Kato, H Kawaji, N Kawagashira, T Kawashima, M Kojima, S Kondo, H Konno, K Nakano, N Ninomiya, T Nishio, M Okada, C Plessy, K Shibata, T Shiraki, S Suzuki, M Tagami, K Waki, A Watahiki, Okamura Y Oho, H Suzuki, J Kawai, Y Hayashizaki

posted to 0900 20050915 3 acid animals base complementarychemistry conserved dna genetic genetics genome genomics govt human humans initiation micegenetics non-us promoter proteinsgenetics regions regulatory research ribonucleic rna rnachemistryclassification sequence sequences site splicing support terminator transcription untranslated untranslatedchemistry by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:43 as

Nature, Vol. 437, No. 7055. (Sep 2005), pp. 94-100.

by EV Linardopoulou, EM Williams, Y Fan, C Friedman, JM Young, BJ Trask

posted to 0900 20050913 acid animals base biology breakagegenetics chromosome chromosomes computational dna duplication extramural factors gene genetic geneticgenetics genome genomics govt homology human humangenetics humans models nih nucleic phs polymorphism primatesgenetics recombination repair research sequence support telomeregenetics time translocation us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:41 as

Nucleic Acids Res, Vol. 32, No. Database issue. (Jan 2004), pp. D109-D111.

by Griffiths S Jones

posted to 0500 20040121 acid animals base biology computational conformation databases humans internet micrornaschemistrygenetics nucleic registries sequence by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:39 as

Genome Res, Vol. 12, No. 6. (Jun 2002), pp. 996-1006.

by WJ Kent, CW Sugnet, TS Furey, KM Roskin, TH Pringle, AM Zahler, D Haussler

posted to 1001 20020702 acid california database databases expression gene genes genetic genome govt homology human humans management messenger non-phs non-us nucleic phs research rna sequence software structural support systems universitiestrends us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:38 as

Nucleic Acids Res, Vol. 33, No. Database issue. (Jan 2005), pp. D447-D453.

by T Hubbard, D Andrews, M Caccamo, G Cameron, Y Chen, M Clamp, L Clarke, G Coates, T Cox, F Cunningham, V Curwen, T Cutts, T Down, R Durbin, Fernandez XM Suarez, J Gilbert, M Hammond, J Herrero, H Hotz, K Howe, V Iyer, K Jekosch, A Kahari, A Kasprzyk, D Keefe, S Keenan, F Kokocinsci, D London, I Longden, G Mcvicker, C Melsopp, P Meidl, S Potter, G Proctor, M Rae, D Rios, M Schuster, S Searle, J Severin, G Slater, D Smedley, J Smith, W Spooner, A Stabenau, J Stalker, R Storey, S Trevanion, Ureta A Vidal, J Vogel, S White, C Woodwark, E Birney

posted to 0900 20050416 acid alignment animals base cattle databases dogs genomics govt humans interface internet mice non-us nucleic phs rats research sequence software support us user-computer by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:37 as

Nucleic Acids Res, Vol. 18, No. 20. (Oct 1990), pp. 6097-6100.

by TD Schneider, RM Stephens

posted to 0001 19901025 acid amino bacteriophage base binding chromosome coligenetics data deletion dna dna-directed elements escherichia genes genetic globinsgenetics govt humans lambdagenetics molecular non-us phs polymerasesmetabolism research rna sequence sites support t-phagesenzymologygenetics techniques transposable us viral by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:35 as

Comput Appl Biosci, Vol. 13, No. 4. (Aug 1997), pp. 477-478.

by R Mott

posted to 0001 16genetics 19970801 acid algorithms alignmentmethodsstatistics base chromosomes complementarygenetics data dna evaluation expression gene genome govt homology human humans molecular non-us nucleic numerical pair recombinant research sequence software studies support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:34 as

Science, Vol. 297, No. 5583. (Aug 2002), pp. 1007-1013.

by WG Fairbrother, RF Yeh, PA Sharp, CB Burge

posted to 1001 20020829 acid analysis biology complementary computational consensus databases dna exons genes genome govt human humans hypoxanthine introns mutation non-us nucleic oligonucleotidesgenetics phosphoribosyltransferasegenetics phs point regulatory research rna sequence sequences splicing support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:23 as

Annu Rev Genet, Vol. 34 (2000), pp. 499-531.

by JM Gott, RB Emeson

posted to 1001 20010307 acid amino base conformation data editing homology messengerchemistrygenetics molecular nucleic rna sequence transferchemistrygenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:21 as