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Group: Stressosome - library [1150 articles]

Neue Artikel von Mitliedern der Gruppe Stressosome Gruppe
  • Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature, Vol. 227, No. 5259. (15 August 1970), pp. 680-685.
    by UK Laemmli
    posted to wet_protocols methods by jwm to the group Stressosome on 2007-09-18 12:48:56 as ** along with 1 person and 1 group davidng Radiation_Damage
  • ZRANK: reranking protein docking predictions with an optimized energy function.
    Proteins, Vol. 67, No. 4. (1 June 2007), pp. 1078-1086.
    by B Pierce, Z Weng
    posted to structural_bioinformatics protein_docking by jwm to the group Stressosome on 2007-09-17 17:38:47 as ** along with 1 person and 1 group bicko Radiation_Damage
  • Modelling protein docking using shape complementarity, electrostatics and biochemical information
    Journal of Molecular Biology, Vol. 272, No. 1. (12 September 1997), pp. 106-120.
    by Henry A Gabb, Richard M Jackson, Michael J Sternberg
    posted to structural_bioinformatics protein_docking by jwm to the group Stressosome on 2007-09-17 15:40:25 as ** along with 7 people and 2 groups bicko yongzhao ima ffranca cjeans selrac kintoki Radiation_Damage TSRI_MGL
  • Modelling repressor proteins docking to DNA.
    Proteins, Vol. 33, No. 4. (1 December 1998), pp. 535-549.
    by P Aloy, G Moont, HA Gabb, E Querol, FX Aviles, MJ Sternberg
    posted to structural_bioinformatics protein_docking by jwm to the group Stressosome on 2007-09-17 15:33:40 as ** along with 1 person and 1 group bpagano Radiation_Damage
  • Use of pair potentials across protein interfaces in screening predicted docked complexes.
    Proteins, Vol. 35, No. 3. (15 May 1999), pp. 364-373.
    by G Moont, HA Gabb, MJ Sternberg
    posted to structural_bioinformatics protein_docking by jwm to the group Stressosome on 2007-09-17 14:50:05 as ** along with 3 people and 1 group bicko chaleil selrac Radiation_Damage
  • Model building of disulfide bonds in proteins with known three-dimensional structure.
    Protein Eng, Vol. 2, No. 2. (July 1988), pp. 119-125.
    by B Hazes, BW Dijkstra
    posted to xtal_software structural_bioinformatics by jwm to the group Stressosome on 2007-09-14 13:19:58 as ** along with 1 group Radiation_Damage
  • Low-molecular-mass polypeptide components of a photosystem II preparation from the thermophilic cyanobacterium Thermosynechococcus vulcanus.
    Plant Cell Physiol, Vol. 43, No. 11. (November 2002), pp. 1366-1373.
    by Y Kashino, H Koike, M Yoshio, H Egashira, M Ikeuchi, HB Pakrasi, K Satoh
    posted to psii_small_subunits by jwm to the group Stressosome on 2007-09-13 15:24:45 as ** along with 1 group Radiation_Damage
  • Stereochemical restraints revisited: how accurate are refinement targets and how much should protein structures be allowed to deviate from them?
    Acta Crystallographica Section D Biological Crystallography
    by Jaskolski
    posted to xtal_software protein_structure_refinement by jwm to the group Stressosome on 2007-09-12 10:21:00 as ** along with 1 group Radiation_Damage
  • Reconstitution of phycobilisome core-membrane linker, LCM, by autocatalytic chromophore binding to ApcE.
    Biochim Biophys Acta, Vol. 1706, No. 1-2. (7 January 2005), pp. 81-87.
    by KH Zhao, P Su, S Böhm, B Song, M Zhou, C Bubenzer, H Scheer
    posted to phycobilisome_lcm phycobiliprotein by jwm to the group Stressosome on 2007-09-11 21:16:52 as ** along with 1 group Radiation_Damage
  • Molecular characterization of the terminal energy acceptor of cyanobacterial phycobilisomes.
    Proc Natl Acad Sci U S A, Vol. 87, No. 6. (March 1990), pp. 2152-2156.
    by J Houmard, V Capuano, MV Colombano, T Coursin, N Tandeau de Marsac
    posted to phycobilisome_lcm phycobiliproteins by jwm to the group Stressosome on 2007-09-11 21:15:10 as ** along with 1 group Radiation_Damage
  • The "anchor polypeptide" of cyanobacterial phycobilisomes. Molecular characterization of the Synechococcus sp. PCC 6301 apce gene.
    J Biol Chem, Vol. 266, No. 11. (15 April 1991), pp. 7239-7247.
    by V Capuano, AS Braux, N Tandeau de Marsac, J Houmard
    posted to phycobilisome_lcm phycobiliproteins by jwm to the group Stressosome on 2007-09-11 21:14:07 as ** along with 1 group Radiation_Damage
  • Photosystem I from the unusual cyanobacterium Gloeobacter violaceus.
    Photosynth Res, Vol. 72, No. 3. (2002), pp. 307-319.
    by D Mangels, J Kruip, S Berry, M Rögner, EJ Boekema, F Koenig
    posted to gloeobacter by jwm to the group Stressosome on 2007-09-11 20:37:41 as ** along with 1 group Radiation_Damage
  • Carotenoid biosynthesis in cyanobacteria: structural and evolutionary scenarios based on comparative genomics.
    Int J Biol Sci, Vol. 2, No. 4. (2006), pp. 197-207.
    by C Liang, F Zhao, W Wei, Z Wen, S Qin
    posted to gloeobacter by jwm to the group Stressosome on 2007-09-11 20:35:34 as ** along with 1 group Radiation_Damage
  • Proton gradients in intact cyanobacteria.
    Plant Physiol, Vol. 84 (1987), pp. 25-30.
    by S Belkin, RJ Mehlhorn, L Packer
    posted to gloeobacter by jwm to the group Stressosome on 2007-09-11 20:27:28 as ** along with 1 group Radiation_Damage
  • The secondary electron acceptor of photosystem I in Gloeobacter violaceus PCC 7421 is menaquinone-4 that is synthesized by a unique but unknown pathway.
    FEBS Lett, Vol. 579, No. 17. (4 July 2005), pp. 3493-3496.
    by M Mimuro, T Tsuchiya, H Inoue, Y Sakuragi, Y Itoh, T Gotoh, H Miyashita, DA Bryant, M Kobayashi
    posted to gloeobacter by jwm to the group Stressosome on 2007-09-11 20:26:14 as ** along with 1 group Radiation_Damage
  • The cyanobacterium Gloeobacter violaceus PCC 7421 uses bacterial-type phytoene desaturase in carotenoid biosynthesis.
    FEBS Lett, Vol. 579, No. 10. (11 April 2005), pp. 2125-2129.
    by T Tsuchiya, S Takaichi, N Misawa, T Maoka, H Miyashita, M Mimuro
    posted to gloeobacter by jwm to the group Stressosome on 2007-09-11 20:23:13 as ** along with 1 group Radiation_Damage
  • Unique fluorescence properties of a cyanobacterium Gloeobacter violaceus PCC 7421: reasons for absence of the long-wavelength PSI Chl a fluorescence at -196 degrees C.
    Plant Cell Physiol, Vol. 43, No. 6. (June 2002), pp. 587-594.
    by M Mimuro, T Ookubo, D Takahashi, T Sakawa, S Akimoto, I Yamazaki, H Miyashita
    posted to gloeobacter by jwm to the group Stressosome on 2007-09-11 20:21:36 as ** along with 1 group Radiation_Damage
  • Carotenoid biosynthesis in Gloeobacter violaceus PCC4721 involves a single crtI-type phytoene desaturase instead of typical cyanobacterial enzymes.
    Arch Microbiol, Vol. 184, No. 4. (December 2005), pp. 207-214.
    by S Steiger, Y Jackisch, G Sandmann
    posted to gloeobacter by jwm to the group Stressosome on 2007-09-11 20:19:03 as ** along with 1 group Radiation_Damage
  • The phycocyanin-associated rod linker proteins of the phycobilisome of Gloeobacter violaceus PCC 7421 contain unusually located rod-capping domains.
    Biochim Biophys Acta, Vol. 1757, No. 2. (February 2006), pp. 130-134.
    by EB Gutiérrez-Cirlos, B Pérez-Gómez, DW Krogmann, C Gómez-Lojero
    posted to gloeobacter by jwm to the group Stressosome on 2007-09-11 20:17:34 as ** along with 1 group Radiation_Damage
  • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.
    Nucleic Acids Res, Vol. 25, No. 24. (15 December 1997), pp. 4876-4882.
    by JD Thompson, TJ Gibson, F Plewniak, F Jeanmougin, DG Higgins
    posted to bioinformatics by jwm to the group Stressosome on 2007-09-10 22:36:05 as ** along with 4 people and 2 groups Auger gelack manzanita carpi Dead 60's Radiation_Damage
  • Asymmetry in the Structure of the ABC Transporter-Binding Protein Complex BtuCD-BtuF.
    Science, Vol. 317, No. 5843. (7 September 2007), pp. 1387-1390.
    by RN Hvorup, BA Goetz, M Niederer, K Hollenstein, E Perozo, KP Locher
    posted to protein_structure abc_transporter by jwm to the group Stressosome on 2007-09-10 10:22:48 as ** along with 1 person and 1 group EvaKaltenborn Radiation_Damage
  • Structure validation by Calpha geometry: phi,psi and Cbeta deviation.
    Proteins, Vol. 50, No. 3. (15 February 2003), pp. 437-450.
    by SC Lovell, IW Davis, WB Arendall, PI de Bakker, JM Word, MG Prisant, JS Richardson, DC Richardson
    posted to xtal_software structure_validation by jwm to the group Stressosome on 2007-09-06 17:07:20 as ** along with 6 people and 1 group aqeel robert dgront xiaobeizhao martainn mijam Radiation_Damage
  • Response of a designed metalloprotein to changes in metal ion coordination, exogenous ligands, and active site volume determined by X-ray crystallography.
    J Am Chem Soc, Vol. 127, No. 49. (14 December 2005), pp. 17266-17276.
    by S Geremia, L Di Costanzo, L Randaccio, DE Engel, A Lombardi, F Nastri, WF DeGrado
    posted to protein_design by jwm to the group Stressosome on 2007-09-03 15:59:25 as ** along with 1 group Radiation_Damage
  • Quantum chemical studies of manganese centers in biology.
    Curr Opin Chem Biol, Vol. 6, No. 2. (April 2002), pp. 227-235.
    by PE Siegbahn
    posted to quantum_chemistry manganese by jwm to the group Stressosome on 2007-09-03 15:36:26 as ** along with 1 group Radiation_Damage
  • Mechanisms of metalloenzymes studied by quantum chemical methods.
    Q Rev Biophys, Vol. 36, No. 1. (February 2003), pp. 91-145.
    by PE Siegbahn
    posted to quantum_chemistry manganese by jwm to the group Stressosome on 2007-09-03 15:36:01 as ** along with 1 group Radiation_Damage
  • Electron tunneling through proteins.
    Q Rev Biophys, Vol. 36, No. 3. (August 2003), pp. 341-372.
    by HB Gray, JR Winkler
    posted to electron_tunneling by jwm to the group Stressosome on 2007-09-03 14:57:55 as ** along with 1 group Radiation_Damage
  • Structural mechanism and photoprotective function of water-soluble chlorophyll-binding protein.
    J Biol Chem, Vol. 282, No. 9. (2 March 2007), pp. 6525-6531.
    by D Horigome, H Satoh, N Itoh, K Mitsunaga, I Oonishi, A Nakagawa, A Uchida
    posted to protein_structure chlorophyll by jwm to the group Stressosome on 2007-09-03 14:08:04 as ** along with 1 group Radiation_Damage
  • PROVAT: a tool for Voronoi tessellation analysis of protein structures and complexes
    Bioinformatics, Vol. 21, No. 15. (1 August 2005), pp. 3316-3317.
    by Swanand P Gore, David F Burke, Tom L Blundell
    posted to structural_bioinformatics skeletonization by jwm to the group Stressosome on 2007-08-25 18:07:14 as ** along with 3 people and 1 group cat_worth siebertm sebk Radiation_Damage
  • The solution and crystal structures of a module pair from the Staphylococcus aureus-binding site of human fibronectin--a tale with a twist.
    J Mol Biol, Vol. 368, No. 3. (4 May 2007), pp. 833-844.
    by E Rudiño-Piñera, RB Ravelli, GM Sheldrick, MH Nanao, VV Korostelev, JM Werner, U Schwarz-Linek, JR Potts, EF Garman
    posted to garman_author fibronectin by jwm to the group Stressosome on 2007-08-10 14:11:08 as ** along with 1 person and 1 group choonpeng Radiation_Damage
  • Structure and orientation of the Mn4Ca cluster in plant photosystem II membranes studied by polarized range-extended x-ray absorption spectroscopy.
    J Biol Chem, Vol. 282, No. 10. (9 March 2007), pp. 7198-7208.
    by Y Pushkar, J Yano, P Glatzel, J Messinger, A Lewis, K Sauer, U Bergmann, V Yachandra
    posted to psii_exafs psii oec mn exafs by jwm to the group Stressosome on 2007-08-09 16:40:04 as ** along with 1 group Radiation_Damage
  • Where water is oxidized to dioxygen: structure of the photosynthetic Mn4Ca cluster.
    Science, Vol. 314, No. 5800. (3 November 2006), pp. 821-825.
    by J Yano, J Kern, K Sauer, MJ Latimer, Y Pushkar, J Biesiadka, B Loll, W Saenger, J Messinger, A Zouni, VK Yachandra
    posted to psii_exafs psii oec mn exafs by jwm to the group Stressosome on 2007-08-09 16:39:17 as ** along with 1 group Radiation_Damage
  • Extended subnanosecond structural dynamics of myoglobin revealed by Laue crystallography.
    Proc Natl Acad Sci U S A, Vol. 103, No. 13. (28 March 2006), pp. 4924-4929.
    by D Bourgeois, B Vallone, A Arcovito, G Sciara, F Schotte, PA Anfinrud, M Brunori
    posted to xtal_methods time-resolved laue by jwm to the group Stressosome on 2007-08-09 15:23:54 as ** along with 1 group Radiation_Damage
  • Factors determining the special redox properties of photosynthetic cytochrome b559.
    Eur J Biochem, Vol. 268, No. 18. (September 2001), pp. 4961-4968.
    by M Roncel, JM Ortega, M Losada
    posted to psii cyt_b559 by jwm to the group Stressosome on 2007-08-07 13:39:38 as ** along with 1 group Radiation_Damage
  • Shape complementarity at protein/protein interfaces.
    J Mol Biol, Vol. 234, No. 4. (20 December 1993), pp. 946-950.
    by MC Lawrence, PM Colman
    posted to xtal_software xtals_methods xtal_methods structural_bioinformatics protein_docking docking ccp4 by jwm to the group Stressosome on 2007-08-07 13:35:44 as ** along with 1 person and 1 group kintoki Radiation_Damage
  • CATH--a hierarchic classification of protein domain structures.
    Structure, Vol. 5, No. 8. (15 August 1997), pp. 1093-1108.
    by CA Orengo, AD Michie, S Jones, DT Jones, MB Swindells, JM Thornton
    posted to structural_bioinformatics protein_classification bioinformatics by jwm to the group Stressosome on 2007-08-07 13:19:05 as ** along with 7 people and 3 groups sim82 massivemayhem tjimenez dimka chad_davis Einat caporaso structural_bioinformatics Radiation_Damage biomedical-nlp
  • The presence of multidomain linkers determines the bundle-shape structure of the phycobilisome of the cyanobacterium Gloeobacter violaceus PCC 7421
    Photosynthesis Research, Vol. 93 (2007), pp. 27-43.
    by David Krogmann, Bertha Pérez-Gómez, Emma Gutiérrez-Cirlos, Alicia Chagolla-López, González, Carlos Gómez-Lojero
    posted to phycoerythrin phycocyanin phycobilisome phycobiliproteins gloeobacter by jwm to the group Stressosome on 2007-08-07 10:14:02 as ** along with 1 group Radiation_Damage
  • Modeling shape and topology of low-resolution density maps of biological macromolecules.
    Biophys J, Vol. 83, No. 2. (August 2002), pp. 619-632.
    by PA De-Alarcón, A Pascual-Montano, A Gupta, JM Carazo
    posted to xtal_software xtal_methods skeletonization model_building by jwm to the group Stressosome on 2007-08-06 17:15:33 as ** along with 1 group Radiation_Damage
  • An improved algorithm to locate critical points in a 3D scalar field as implemented in the program MORPHY.
    J Comput Chem, Vol. 24, No. 4. (March 2003), pp. 437-442.
    by NO Malcolm, PL Popelier
    posted to xtal_software xtal_methods skeletonization model_building by jwm to the group Stressosome on 2007-08-06 16:59:40 as ** along with 1 group Radiation_Damage
  • Core tracing: depicting connections between features in electron density.
    Acta Crystallogr D Biol Crystallogr, Vol. 50, No. Pt 5. (1 September 1994), pp. 695-708.
    by SM Swanson
    posted to xtal_software xtal_methods skeletonization model_building by jwm to the group Stressosome on 2007-08-06 16:55:56 as ** along with 1 group Radiation_Damage
  • A novel strategy for the crystallization of proteins: X-ray diffraction validation
    Acta Crystallographica Section D Biological Crystallography
    by Larson
    posted to xtal_methods protein_crystallization crystallization by jwm to the group Stressosome on 2007-08-06 14:49:01 as ** along with 1 group Radiation_Damage
  • Using X-ray absorption spectra to monitor specific radiation damage to anomalously scattering atoms in macromolecular crystallography
    Acta Crystallographica Section D Biological Crystallography, Vol. 63, No. 7. (2007), pp. 759-768.
    by V Oliéric, E Ennifar, A Meents, M Fleurant, C Besnard, P Pattison, M Schiltz, C Schulze-Briese, P Dumas
    posted to xtal_methods radiation_damage exafs by jwm to the group Stressosome on 2007-08-03 14:17:49 as ** along with 1 group Radiation_Damage
  • Phaser crystallographic software
    Journal of Applied Journal of Applied Crystallography, Vol. 40 (2007), pp. 658-674.
    by Airlie J Mccoy, Ralf W Grosse-Kunstleve, Paul D Adams, Martyn D Winn, Laurent C Storoni, Randy J Read
    posted to xtal_software xtal_methods molecular_replacement by jwm to the group Stressosome on 2007-08-03 14:14:35 as ** along with 1 group Radiation_Damage
  • Five retracted structure reports: inverted or incorrect?
    Protein Sci, Vol. 16, No. 6. (June 2007), pp. 1013-1016.
    by BW Matthews
    posted to xtal_methods retraction blunder by jwm to the group Stressosome on 2007-08-03 13:29:23 as ** along with 1 group Radiation_Damage
  • The active form of Chlamydia trachomatis ribonucleotide reductase R2 protein contains a heterodinuclear Mn(IV)/Fe(III) cluster with S = 1 ground state.
    J Am Chem Soc, Vol. 129, No. 24. (20 June 2007), pp. 7504-7505.
    by W Jiang, JM Bollinger, C Krebs
    posted to ribonucleotide_reductase mn_enzyme mn by jwm to the group Stressosome on 2007-08-01 13:11:13 as ** along with 1 group Radiation_Damage
  • A manganese(IV)/iron(III) cofactor in Chlamydia trachomatis ribonucleotide reductase.
    Science, Vol. 316, No. 5828. (25 May 2007), pp. 1188-1191.
    by W Jiang, D Yun, L Saleh, EW Barr, G Xing, LM Hoffart, MA Maslak, C Krebs, JM Bollinger
    posted to ribonucleotide_reductase mn_enzyme mn by jwm to the group Stressosome on 2007-08-01 13:10:58 as ** along with 1 group Radiation_Damage
  • High catalytic activity achieved with a mixed manganese-iron site in protein R2 of Chlamydia ribonucleotide reductase.
    FEBS Lett, Vol. 581, No. 18. (24 July 2007), pp. 3351-3355.
    by N Voevodskaya, F Lendzian, A Ehrenberg, A Gräslund
    posted to ribonucleotide_reductase mn_enzyme mn by jwm to the group Stressosome on 2007-08-01 13:10:41 as ** along with 1 group Radiation_Damage
  • eMovie: a storyboard-based tool for making molecular movies.
    Trends Biochem Sci, Vol. 32, No. 5. (May 2007), pp. 199-204.
    by E Hodis, G Schreiber, K Rother, JL Sussman
    posted to molecular_movie molecular_graphics by jwm to the group Stressosome on 2007-08-01 13:03:10 as ** along with 1 group Radiation_Damage
  • Candidatus Chloracidobacterium thermophilum: an aerobic phototrophic Acidobacterium.
    Science, Vol. 317, No. 5837. (27 July 2007), pp. 523-526.
    by DA Bryant, AM Costas, JA Maresca, AG Chew, CG Klatt, MM Bateson, LJ Tallon, J Hostetler, WC Nelson, JF Heidelberg, DM Ward
    posted to photosynthesis non_oxygenic_photosynthesis by jwm to the group Stressosome on 2007-07-31 14:02:07 as ** along with 1 person and 2 groups kinestetika Radiation_Damage microbiology_nijmegen
  • Three-dimensional pattern recognition: an approach to automated interpretation of electron density maps of proteins.
    J Mol Biol, Vol. 82, No. 3. (25 January 1974), pp. 279-301.
    by J Greer
    posted to skeletonization model_building cavities by jwm to the group Stressosome on 2007-07-30 13:35:33 as ** along with 1 group Radiation_Damage
  • Molecular speleology: the exploration of crevices in proteins for prediction of binding sites, design of drugs and analysis of surface recognition
    Acta Crystallographica, Vol. A42 (1986), pp. 83-85.
    by AM Lesk
    posted to structural_bioinformatics cavities by jwm to the group Stressosome on 2007-07-30 13:22:19 as ** along with 1 group Radiation_Damage
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