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Group: structural_bioinformatics - with tag folding [18 articles]

Neue Artikel von Mitliedern der Gruppe structural_bioinformatics Gruppe with tag folding
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  • Why highly expressed proteins evolve slowly.
    Proc Natl Acad Sci U S A (21 September 2005)
    by D Allan A Drummond, Jesse D D Bloom, Christoph Adami, Claus O O Wilke, Frances H H Arnold
    posted to protein_structure protein-stability folding evolution by Einat to the group structural_bioinformatics on 2007-04-04 15:21:31 as ** along with 14 people and 4 groups rklancer stevanspringer bjorns imouthesmp aprasad dayjm marcius xwbcn penka balabu malcook balicea RamuAnandakrishnan wilbur Nie FAB-lab BioinfoCIPF SGU-CIPF
  • SNPs, Silent But Not Invisible.
    Science (21 December 2006)
    by Anton A A Komar
    posted to folding protein_structure snps by Einat to the group structural_bioinformatics on 2007-02-20 14:27:10 as ** along with 4 people and 2 groups misonneh dchughes massivemayhem cat_worth G4ID Genetics-of-Gambling
  • Conserved residues and the mechanism of protein folding.
    Nature, Vol. 379, No. 6560. (4 January 1996), pp. 96-98.
    by E Shakhnovich, V Abkevich, O Ptitsyn
    posted to conservation folding by Einat to the group structural_bioinformatics on 2007-02-18 13:07:51 as ** along with 2 people cat_worth medic0747
  • The folding of an enzyme. VI. The folding pathway of barnase: comparison with theoretical models.
    J Mol Biol, Vol. 224, No. 3. (5 April 1992), pp. 847-859.
    by L Serrano, A Matouschek, AR Fersht
    posted to folding by cat_worth to the group structural_bioinformatics on 2007-01-26 10:35:34 as **
  • Funnels, pathways, and the energy landscape of protein folding: a synthesis.
    Proteins, Vol. 21, No. 3. (March 1995), pp. 167-195.
    by JD Bryngelson, JN Onuchic, ND Socci, PG Wolynes
    posted to folding by Einat to the group structural_bioinformatics on 2006-06-08 14:50:42 as ** along with 2 people kedmond dgront
  • Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A.
    Proc Natl Acad Sci U S A, Vol. 96, No. 22. (26 October 1999), pp. 12512-12517.
    by JE Shea, JN Onuchic, CL Brooks
    posted to folding by Einat to the group structural_bioinformatics on 2006-06-08 14:37:39 as ** along with 1 person rsantana
  • A Statistical Method for Predicting Protein Unfolding Rates from Amino Acid Sequence.
    J Chem Inf Model, Vol. 46, No. 3. (22 May 2006), pp. 1503-1508.
    by M M Gromiha, S Selvaraj, A M Thangakani
    posted to folding structural-class by Einat to the group structural_bioinformatics on 2006-05-25 11:53:23 as **
  • Is there a unifying mechanism for protein folding?
    Trends Biochem Sci, Vol. 28, No. 1. (January 2003), pp. 18-25.
    by V Daggett, AR Fersht
    posted to folding folding_nucleation review secondary-structure by Einat to the group structural_bioinformatics on 2006-04-04 16:43:26 as ** along with 4 people dgront allmensch rabio mirzazadeh
  • Side-chain entropy effects on protein secondary structure formation.
    Proteins, Vol. 62, No. 2. (1 February 2006), pp. 411-420.
    by Brian W W Chellgren, Trevor P P Creamer
    posted to alpha-helix beta-strand entropy flexibility folding secondary-structure by Einat to the group structural_bioinformatics on 2005-12-27 14:04:22 as *****
  • The order of secondary structure elements does not determine the structure of a protein but does affect its folding kinetics.
    J Mol Biol, Vol. 247, No. 4. (7 April 1995), pp. 670-681.
    by AR Viguera, FJ Blanco, L Serrano
    posted to folding kinetics topology by Einat to the group structural_bioinformatics on 2005-12-27 09:07:05 as ****
  • Symmetric Connectivity of Secondary Structure Elements Enhances the Diversity of Folding Pathways.
    J Mol Biol (29 September 2005)
    by Dmitri K K Klimov, D Thirumalai
    posted to folding secondary-structure topology by Einat to the group structural_bioinformatics on 2005-10-17 11:43:37 as *****
  • A surprising simplicity to protein folding.
    Nature, Vol. 405, No. 6782. (4 May 2000), pp. 39-42.
    by D Baker
    posted to folding by Einat to the group structural_bioinformatics on 2005-10-03 14:49:42 as ** along with 4 people imouthesmp gbart mirzazadeh phoenixzxl
  • Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics.
    Biochemistry, Vol. 39, No. 37. (19 September 2000), pp. 11177-11183.
    by KW Plaxco, KT Simons, I Ruczinski, D Baker
    posted to folding topology by Einat to the group structural_bioinformatics on 2005-10-03 14:48:37 as ***
  • Comparing Folding Codes in Simple Heteropolymer Models of Protein Evolutionary Landscape: Robustness of the Superfunnel Paradigm
    Biophysical Journal, Vol. 88, No. 1. (2005), pp. 118-131.
    by Richard Wroe, Erich Bornberg-Bauer, Hue S Chan
    posted to evolution folding neutral-networks superfunnel by Einat to the group structural_bioinformatics on 2005-10-02 15:45:47 as ** along with 1 person bpb
  • Entropic Stabilization of Proteins and Its Proteomic Consequences
    PLoS Computational Biology:, Vol. 1, No. 4. (September 2005), e47.
    by Igor N Berezovsky, William W Chen, Paul J Choi, Eugene I Shakhnovich
    posted to conformation evolution folding robustness by Einat to the group structural_bioinformatics on 2005-10-02 14:33:21 as ****
  • Side-chain entropy opposes alpha-helix formation but rationalizes experimentally determined helix-forming propensities.
    Proc Natl Acad Sci U S A, Vol. 89, No. 13. (1 July 1992), pp. 5937-5941.
    by TP Creamer, GD Rose
    posted to alpha-helix folding secondary-structure by Einat to the group structural_bioinformatics on 2005-09-26 10:27:53 as **
  • Intrinsic secondary structure propensities of the amino acids, using statistical phi-psi matrices: comparison with experimental scales.
    Proteins, Vol. 20, No. 4. (December 1994), pp. 301-311.
    by V Muñoz, L Serrano
    posted to folding secondary-structure by Einat to the group structural_bioinformatics on 2005-09-25 15:05:42 as **
  • Modeling evolutionary landscapes: mutational stability, topology, and superfunnels in sequence space.
    Proc Natl Acad Sci U S A, Vol. 96, No. 19. (14 September 1999), pp. 10689-10694.
    by E Bornberg-Bauer, HS Chan
    posted to folding networks neutral superfunnel by Einat to the group structural_bioinformatics on 2005-09-21 11:16:35 as read along with 2 people alexisgallagher gokhan
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