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New types of conserved sequence domains in DNA-binding regions of homing endonucleases.

Trends Biochem Sci, Vol. 28, No. 9. (September 2003), pp. 473-477.


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We have identified four new types of short conserved sequence domains in homing endonucleases and related proteins. These domains are modular, appearing in various combinations. One domain includes a motif known by structure as a novel sequence-specific DNA-binding helix. Sequence similarity shows two other domains to be new types of helix-turn-helix DNA-binding domains. We term the new domains nuclease-associated modular DNA-binding domains (NUMODs).


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