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Group: EBI-regulation - library [222 articles]

Neue Artikel von Mitliedern der Gruppe EBI-regulation Gruppe
  • Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
    Nature (22 March 2006)
    by Nevan J Krogan, Gerard Cagney, Haiyuan Yu, Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P Tikuisis, Thanuja Punna, Josã© M Peregrã­n-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D Robinson, Alberto Paccanaro, James E Bray, Anthony Sheung, Bryan Beattie, Dawn P Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R Collins, Shamanta Chandran, Robin Haw, Jennifer J Rilstone, Kiran Gandi, Natalie J Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy HY Lam, Gareth Butland, Amin M Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S Weissman, James C Ingles, Timothy R Hughes, John Parkinson, Mark Gerstein, Shoshana J Wodak, Andrew Emili, Jack F Greenblatt
    posted to interaction protein yeast by nickluscombe to the group EBI-regulation on 2006-04-02 20:08:46 as ***** along with 22 people and 3 groups jiny Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite koller raiyar cjeans nicoleq Evangelia csaveanu frohike carlk hplatero chasmand mapplab ethkim kdl BioinfoCIPF SGU-CIPF
  • MOLECULAR BIOLOGY: Managing Associations Between Different Chromosomes
    Science, Vol. 312, No. 5771. (14 April 2006), pp. 207-208.
    by Charalampos G Spilianakis, Richard A Flavell
    posted to expression regulation by nickluscombe to the group EBI-regulation on 2006-04-13 23:49:32 as ****
  • BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System.
    PLoS Biol, Vol. 4, No. 4. (April 2006)
    by S Magdaleno, P Jensen, CL Brumwell, A Seal, K Lehman, A Asbury, T Cheung, T Cornelius, DM Batten, C Eden, SM Norland, DS Rice, N Dosooye, S Shakya, P Mehta, T Curran
    posted to development expression mammals by nickluscombe to the group EBI-regulation on 2006-04-11 20:41:27 as ****
  • Regulating quiescence: new insights into hematopoietic stem cell biology.
    Dev Cell, Vol. 10, No. 4. (April 2006), pp. 415-417.
    by E Passegué, AJ Wagers
    posted to cells regulation stem by nickluscombe to the group EBI-regulation on 2006-04-05 21:40:12 as ****
  • Spatial complexity of mechanisms controlling a bacterial cell cycle.
    Curr Opin Microbiol, Vol. 7, No. 6. (December 2004), pp. 572-578.
    by PH Viollier, L Shapiro
    posted to no-tag by nickluscombe to the group EBI-regulation on 2006-04-05 00:28:46 as ****
  • Global analysis of protein phosphorylation in yeast
    Nature, Vol. 438, No. 7068., pp. 679-684.
    by Jason Ptacek, Geeta Devgan, Gregory Michaud, Heng Zhu, Xiaowei Zhu, Joseph Fasolo, Hong Guo, Ghil Jona, Ashton Breitkreutz, Richelle Sopko, Rhonda R Mccartney, Martin C Schmidt, Najma Rachidi, Soo-Jung Lee, Angie S Mah, Lihao Meng, Michael JR Stark, David F Stern, Claudio De Virgilio, Mike Tyers, Brenda Andrews, Mark Gerstein, Barry Schweitzer, Paul F Predki, Michael Snyder
    posted to phosphoralome yeast by nickluscombe to the group EBI-regulation on 2006-04-04 10:51:00 as **** along with 6 people tmmurali tuck balabu koller carlk neils
  • Conservation of RET Regulatory Function from Human to Zebrafish Without Sequence Similarity.
    Science (23 March 2006)
    by Shannon Fisher, Elizabeth A A Grice, Ryan M M Vinton, Seneca L L Bessling, Andrew S S McCallion
    posted to evolution regulation by nickluscombe to the group EBI-regulation on 2006-04-13 23:52:06 as *** along with 5 people and 2 groups aprasad adepace maximilianh cisevol emptyhb EisenLab cis-regulatory-evolution
  • Systematic interpretation of genetic interactions using protein networks
    Nature Biotechnology, Vol. 23, No. 5. (05 May 2005), pp. 561-566.
    by Ryan Kelley, Trey Ideker
    posted to metabolism synthetic-lethal yeast by nickluscombe to the group EBI-regulation on 2006-04-12 09:19:00 as *** along with 14 people and 1 group lptolik nedwards okarsligil tuck balajis wnpx nirfriedman mmt koller massivemayhem patrycjam patrycja_missiuro mingzhi carlk Bioinformatics
  • A hidden metabolic pathway exposed.
    Proc Natl Acad Sci U S A (4 April 2006)
    by Andrei Osterman
    posted to bacteria ecoli metabolism by nickluscombe to the group EBI-regulation on 2006-04-11 20:32:28 as *** along with 2 people tny aswin
  • Building a multicellular organism.
    Annu Rev Genet, Vol. 35 (2001), pp. 103-123.
    by D Kaiser
    posted to bacteria multicellularity by nickluscombe to the group EBI-regulation on 2006-04-11 15:40:31 as *** along with 3 people balicea aswin stajich
  • Thinking about bacterial populations as multicellular organisms.
    Annu Rev Microbiol, Vol. 52 (1998), pp. 81-104.
    by JA Shapiro
    posted to bacteria multicellularity by nickluscombe to the group EBI-regulation on 2006-04-10 14:57:23 as ***
  • Chromosome-wide gene-specific targeting of the Drosophila dosage compensation complex.
    Genes Dev (17 March 2006)
    by Gregor D D Gilfillan, Tobias Straub, Elzo de Wit, Frauke Greil, Rosemarie Lamm, Bas van Steensel, Peter B B Becker
    posted to compensation dosage fly x-chromosome by nickluscombe to the group EBI-regulation on 2006-04-06 11:40:23 as *** along with 1 person stonebas
  • High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome.
    Genes Dev (17 March 2006)
    by Artyom A A Alekseyenko, Erica Larschan, Weil R R Lai, Peter J J Park, Mitzi I I Kuroda
    posted to compensation dosage fly x-chromosome by nickluscombe to the group EBI-regulation on 2006-04-06 11:38:59 as *** along with 1 person eukfn
  • X-chromosome-wide profiling of MSL-1 distribution and dosage compensation in Drosophila.
    Genes Dev (17 March 2006)
    by Gaëlle Legube, Shannon K K McWeeney, Martin J J Lercher, Asifa Akhtar
    posted to compensation dosage fly x-chromosome by nickluscombe to the group EBI-regulation on 2006-04-06 11:30:19 as ***
  • Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila.
    Mol Cell, Vol. 21, No. 6. (17 March 2006), pp. 811-823.
    by S Mendjan, M Taipale, J Kind, H Holz, P Gebhardt, M Schelder, M Vermeulen, A Buscaino, K Duncan, J Mueller, M Wilm, HG Stunnenberg, H Saumweber, A Akhtar
    posted to compensation dosage fly x-chromosome by nickluscombe to the group EBI-regulation on 2006-04-06 11:29:54 as ***
  • Similar gene expression profiles do not imply similar tissue functions.
    Trends Genet, Vol. 22, No. 3. (March 2006), pp. 132-138.
    by I Yanai, JO Korbel, S Boue, SK McWeeney, P Bork, MJ Lercher
    posted to expression mammals by nickluscombe to the group EBI-regulation on 2006-04-04 20:07:51 as *** along with 1 person cjeans
  • Gene expression patterns in human placenta.
    Proc Natl Acad Sci U S A (27 March 2006)
    by Ruchira Sood, James L L Zehnder, Maurice L L Druzin, Patrick O O Brown
    posted to expression human by nickluscombe to the group EBI-regulation on 2006-04-04 19:58:09 as ***
  • E-mail decay rates among corresponding authors in MEDLINE.
    EMBO Rep, Vol. 7, No. 2. (February 2006), pp. 122-127.
    by JD Wren, JE Grissom, T Conway
    posted to no-tag by nickluscombe to the group EBI-regulation on 2006-04-03 21:04:23 as *** along with 1 person hpiwowar
  • Functional classification of drugs by properties of their pairwise interactions
    Nature Genetics, Vol. 38, No. 4. (19 March 2006), pp. 489-494.
    by Pamela Yeh, Ariane I Tschumi, Roy Kishony
    posted to bacteria drugs by nickluscombe to the group EBI-regulation on 2006-04-03 14:38:59 as *** along with 3 people lingchong nirfriedman madhadron
  • A genomic perspective on plant transcription factors.
    Curr Opin Plant Biol, Vol. 3, No. 5. (October 2000), pp. 423-434.
    by JL Riechmann, OJ Ratcliffe
    posted to arabidopsis regulation transcription by nickluscombe to the group EBI-regulation on 2006-04-02 19:18:03 as ***
  • Distinct class of putative "non-conserved" promoters in humans: Comparative studies of alternative promoters of human and mouse genes
    Genome Res., Vol. 17, No. 7. (1 July 2007), pp. 1005-1014.
    by Katsuki Tsuritani, Takuma Irie, Riu Yamashita, Yuta Sakakibara, Hiroyuki Wakaguri, Akinori Kanai, Junko Mizushima-Sugano, Sumio Sugano, Kenta Nakai, Yutaka Suzuki
    posted to promoters mammals by nickluscombe to the group EBI-regulation on 2007-07-03 12:46:58 as ** along with 6 people and 1 group djkt cabbagezs toshiaki_katayama kmdaily antonkratz cisevol cis-regulatory-evolution
  • A novel view of the transcriptome revealed from gene trapping in mouse embryonic stem cells
    Genome Res., Vol. 17, No. 7. (1 July 2007), pp. 1051-1060.
    by Guglielmo Roma, Gilda Cobellis, Pamela Claudiani, Francesco Maione, Pedro Cruz, Gaetano Tripoli, Marco Sardiello, Ivana Peluso, Elia Stupka
    posted to stem expression by nickluscombe to the group EBI-regulation on 2007-07-03 12:46:13 as ** along with 1 person hplatero
  • Microbial genome data resources
    Current Opinion in Biotechnology, Vol. 18, No. 3. (June 2007), pp. 267-272.
    by Victor M Markowitz
    posted to bacteria by nickluscombe to the group EBI-regulation on 2007-07-03 12:36:49 as **
  • Systematic Discovery of In Vivo Phosphorylation Networks
    Cell, Vol. 129, No. 7. (29 June 2007), pp. 1415-1426.
    by Rune Linding, Lars J Jensen, Gerard J Ostheimer, Marcel A van Vugt, Claus Jorgensen, Ioana M Miron, Francesca Diella, Karen Colwill, Lorne Taylor, Kelly Elder, Pavel Metalnikov, Vivian Nguyen, Adrian Pasculescu, Jing Jin, Jin G Park, Leona D Samson, James R Woodgett, Robert B Russell, Peer Bork, Michael B Yaffe, Tony Pawson
    posted to no-tag by nickluscombe to the group EBI-regulation on 2007-07-03 12:33:40 as **
  • Genetic reconstruction of a functional transcriptional regulatory network.
    Nat Genet (8 April 2007)
    by Zhanzhi Hu, Patrick J J Killion, Vishwanath R R Iyer
    posted to yeast tf expression by nickluscombe to the group EBI-regulation on 2007-06-13 09:45:15 as ** along with 12 people and 5 groups behindtherabbit ptrobajo dpollard xico zwang lizabeth dejori xingxu naegele czeller mapplab siebert Bioinformatics EisenLab WetBiology ic4 generif_paper
  • Network activity-independent coordinated gene expression program for synapse assembly.
    Proc Natl Acad Sci U S A, Vol. 104, No. 11. (13 March 2007), pp. 4658-4663.
    by LM Valor, P Charlesworth, L Humphreys, CN Anderson, SG Grant
    posted to expression brain by nickluscombe to the group EBI-regulation on 2007-06-11 09:08:34 as **
  • Probing Transcription Factor Dynamics at the Single-Molecule Level in a Living Cell
    Science, Vol. 316, No. 5828. (25 May 2007), pp. 1191-1194.
    by Johan Elf, Gene-Wei Li, Sunney X Xie
    posted to no-tag by nickluscombe to the group EBI-regulation on 2007-05-29 07:57:04 as ** along with 7 people and 2 groups jjray dpollard madhadron balabu samjlord austin ras EisenLab moernerlab
  • Deregulated homeobox gene expression in cancer: cause or consequence?
    Nat Rev Cancer, Vol. 2, No. 10. (October 2002), pp. 777-785.
    by C Abate-Shen
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 13:02:40 as **
  • The genesis and evolution of homeobox gene clusters
    Nature Reviews Genetics, Vol. 6, No. 12. (10 November 2005), pp. 881-892.
    by Jordi Garcia-Fernàndez
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 13:01:51 as ** along with 7 people and 1 group brant balicea emilyhare BioMaxi timflutre blobbybirdman blackm0k EisenLab
  • Transcription factors: the right combination for the DNA lock.
    Curr Biol, Vol. 9, No. 12. (17 June 1999)
    by S Khorasanizadeh, F Rastinejad
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 13:00:54 as **
  • Homeodomain revisited: a lesson from disease-causing mutations.
    Hum Genet, Vol. 116, No. 6. (May 2005), pp. 433-444.
    by YI Chi
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:59:31 as **
  • LIM-homeodomain genes in mammalian development and human disease.
    Mol Biol Rep, Vol. 32, No. 2. (June 2005), pp. 67-77.
    by CS Hunter, SJ Rhodes
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:58:08 as **
  • Homeodomain interactions.
    Curr Opin Struct Biol, Vol. 6, No. 1. (February 1996), pp. 62-68.
    by C Wolberger
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:45:40 as **
  • Combinatorial transcription factors.
    Curr Opin Genet Dev, Vol. 8, No. 5. (October 1998), pp. 552-559.
    by C Wolberger
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:44:09 as **
  • Multiprotein-DNA complexes in transcriptional regulation.
    Annu Rev Biophys Biomol Struct, Vol. 28 (1999), pp. 29-56.
    by C Wolberger
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:43:00 as ** along with 1 person and 2 groups barry structural_bioinformatics Bioinformatics
  • The T-box family
    Genome Biology, Vol. 3, No. 6. (2002), pp. reviews3008.1-reviews3008.7.
    by Val Wilson, Frank Conlon
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:41:09 as **
  • KRAB-containing zinc-finger repressor proteins
    Genome Biology, Vol. 4, No. 10. (2003)
    by Raul Urrutia
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:40:23 as **
  • The AP-2 family of transcription factors.
    Genome Biol, Vol. 6, No. 13. (2005)
    by D Eckert, S Buhl, S Weber, R Jäger, H Schorle
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:39:26 as **
  • Transcriptional activation by recruitment.
    Nature, Vol. 386, No. 6625. (10 April 1997), pp. 569-577.
    by M Ptashne, A Gann
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:29:19 as **
  • Yeast transcriptional regulatory mechanisms.
    Annu Rev Genet, Vol. 29 (1995), pp. 651-674.
    by K Struhl
    posted to yeast tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:28:53 as **
  • The Evolution of Transcriptional Regulation in Eukaryotes
    Mol Biol Evol, Vol. 20, No. 9. (1 September 2003), pp. 1377-1419.
    by Gregory A Wray, Matthew W Hahn, Ehab Abouheif, James P Balhoff, Margaret Pizer, Matthew V Rockman, Laura A Romano
    posted to tf evolution by nickluscombe to the group EBI-regulation on 2007-05-23 12:27:04 as ** along with 8 people and 4 groups ana dpollard adepace anatiferous mimulus_99 cisevol emptyhb emmahe structural_bioinformatics Bioinformatics EisenLab cis-regulatory-evolution
  • Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms.
    Mol Cell Biol, Vol. 20, No. 2. (January 2000), pp. 429-440.
    by ME Massari, C Murre
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:25:52 as ** along with 4 people jyuh tuck balicea heliopais
  • Recognition of specific DNA sequences.
    Mol Cell, Vol. 8, No. 5. (November 2001), pp. 937-946.
    by CW Garvie, C Wolberger
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:24:41 as **
  • An overview of the basic helix-loop-helix proteins.
    Genome Biol, Vol. 5, No. 6. (2004)
    by S Jones
    posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:23:33 as ** along with 1 person jyuh
  • Coding limits on the number of transcription factors
    BMC Genomics, Vol. 7 (19 September 2006), 239.
    by Shalev Itzkovitz, Tsvi Tlusty, Uri Alon
    posted to no-tag by nickluscombe to the group EBI-regulation on 2007-05-23 12:15:20 as ** along with 1 person and 1 group brant EisenLab
  • Modelling Transcriptional Interference and DNA Looping in Gene Regulation.
    J Mol Biol (20 April 2007)
    by Ian B B Dodd, Keith E E Shearwin, Kim Sneppen
    posted to modelling by nickluscombe to the group EBI-regulation on 2007-05-18 09:19:02 as **
  • The Increasing Dominance of Teams in Production of Knowledge
    Science, Vol. 316, No. 5827. (18 May 2007), pp. 1036-1039.
    by Stefan Wuchty, Benjamin F Jones, Brian Uzzi
    posted to social by nickluscombe to the group EBI-regulation on 2007-05-18 09:00:39 as ** along with 6 people hpiwowar cmmorel dullhunk MariaChiaraP franzkurfess fisherp
  • The genome of the kinetoplastid parasite, Leishmania major.
    Science, Vol. 309, No. 5733. (15 July 2005), pp. 436-442.
    by AC Ivens, CS Peacock, EA Worthey, L Murphy, G Aggarwal, M Berriman, E Sisk, MA Rajandream, E Adlem, R Aert, A Anupama, Z Apostolou, P Attipoe, N Bason, C Bauser, A Beck, SM Beverley, G Bianchettin, K Borzym, G Bothe, CV Bruschi, M Collins, E Cadag, L Ciarloni, C Clayton, RM Coulson, A Cronin, AK Cruz, RM Davies, J De Gaudenzi, DE Dobson, A Duesterhoeft, G Fazelina, N Fosker, AC Frasch, A Fraser, M Fuchs, C Gabel, A Goble, A Goffeau, D Harris, C Hertz-Fowler, H Hilbert, D Horn, Y Huang, S Klages, A Knights, M Kube, N Larke, L Litvin, A Lord, T Louie, M Marra, D Masuy, K Matthews, S Michaeli, JC Mottram, S Müller-Auer, H Munden, S Nelson, H Norbertczak, K Oliver, S O'neil, M Pentony, TM Pohl, C Price, B Purnelle, MA Quail, E Rabbinowitsch, R Reinhardt, M Rieger, J Rinta, J Robben, L Robertson, JC Ruiz, S Rutter, D Saunders, M Schäfer, J Schein, DC Schwartz, K Seeger, A Seyler, S Sharp, H Shin, D Sivam, R Squares, S Squares, V Tosato, C Vogt, G Volckaert, R Wambutt, T Warren, H Wedler, J Woodward, S Zhou, W Zimmermann, DF Smith, JM Blackwell, KD Stuart, B Barrell, PJ Myler
    posted to no-tag by nickluscombe to the group EBI-regulation on 2007-05-09 12:29:58 as ** along with 1 person mariakmejia
  • Refinement and expansion of signaling pathways: the osmotic response network in yeast.
    Genome Res, Vol. 17, No. 3. (March 2007), pp. 358-367.
    by I Gat-Viks, R Shamir
    posted to yeast transcription by nickluscombe to the group EBI-regulation on 2007-04-30 10:45:20 as ** along with 2 people dragonrez roys
  • Conservation of Regional Gene Expression in Mouse and Human Brain
    PLoS Genetics, Vol. 3, No. 4. (1 April 2007), e59.
    by Andrew D Strand, Aaron K Aragaki, Zachary C Baquet, Angela Hodges, Philip Cunningham, Peter Holmans, Kevin R Jones, Lesley Jones, Charles Kooperberg, James M Olson
    posted to expression conservation brain by nickluscombe to the group EBI-regulation on 2007-04-23 19:22:36 as ** along with 7 people jeremymiller Iden-J_GluR cjeans ghattem suizan ppark klo
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