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Autor Pennacchio [17 articles]

Neu eingetragene Papers vom Autor: Pennacchio.
  • The amphioxus genome illuminates vertebrate origins and cephalochordate biology
    Genome Res., Vol. 18, No. 7. (1 July 2008), pp. 1100-1111.
    by Linda Z Holland, Ricard Albalat, Kaoru Azumi, Elia Benito-Gutierrez, Matthew J Blow, Marianne Bronner-Fraser, Frederic Brunet, Thomas Butts, Simona Candiani, Larry J Dishaw, David E Ferrier, Jordi Garcia-Fernandez, Jeremy J Gibson-Brown, Carmela Gissi, Adam Godzik, Finn Hallbook, Dan Hirose, Kazuyoshi Hosomichi, Tetsuro Ikuta, Hidetoshi Inoko, Masanori Kasahara, Jun Kasamatsu, Takeshi Kawashima, Ayuko Kimura, Masaaki Kobayashi, Zbynek Kozmik, Kaoru Kubokawa, Vincent Laudet, Gary W Litman, Alice C Mchardy, Daniel Meulemans, Masaru Nonaka, Robert P Olinski, Zeev Pancer, Len A Pennacchio, Mario Pestarino, Jonathan P Rast, Isidore Rigoutsos, Marc Robinson-Rechavi, Graeme Roch, Hidetoshi Saiga, Yasunori Sasakura, Masanobu Satake, Yutaka Satou, Michael Schubert, Nancy Sherwood, Takashi Shiina, Naohito Takatori, Javier Tello, Pavel Vopalensky, Shuichi Wada, Anlong Xu, Yuzhen Ye, Keita Yoshida, Fumiko Yoshizaki, Jr-Kai Yu, Qing Zhang, Christian M Zmasek, Pieter J de Jong, Kazutoyo Osoegawa, Nicholas H Putnam, Daniel S Rokhsar, Noriyuki Satoh, Peter W Holland
    posted to vertebrate genome evolution amphioxus by gulsacan on 2008-07-04 16:24:53 as ** along with 1 person dchughes
  • The amphioxus genome and the evolution of the chordate karyotype
    Nature, Vol. 453, No. 7198. (19 June 2008), pp. 1064-1071.
    by Nicholas H Putnam, Thomas Butts, David E Ferrier, Rebecca F Furlong, Uffe Hellsten, Takeshi Kawashima, Marc Robinson-Rechavi, Eiichi Shoguchi, Astrid Terry, Jr-Kai Yu, E[grave]lia Benito-Gutierrez, Inna Dubchak, Jordi Garcia-Fernandez, Jeremy J Gibson-Brown, Igor V Grigoriev, Amy C Horton, Pieter J de Jong, Jerzy Jurka, Vladimir V Kapitonov, Yuji Kohara, Yoko Kuroki, Erika Lindquist, Susan Lucas, Kazutoyo Osoegawa, Len A Pennacchio, Asaf A Salamov, Yutaka Satou, Tatjana Sauka-Spengler, Jeremy Schmutz, Tadasu Shin-I, Atsushi Toyoda, Marianne Bronner-Fraser, Asao Fujiyama, Linda Z Holland, Peter W Holland, Nori Satoh, Daniel S Rokhsar
    posted to genom evolutionary evo-devo by gulsacan on 2008-06-19 17:16:31 as ** along with 1 person neils
  • Close sequence comparisons are sufficient to identify human cis-regulatory elements.
    Genome Res (12 June 2006)
    by Shyam Prabhakar, Francis Poulin, Malak Shoukry, Veena Afzal, Edward M M Rubin, Olivier Couronne, Len A A Pennacchio
    posted to genetic_regulation by mariakmejia on 2008-05-06 00:21:50 as ** along with 6 people and 2 groups indigoviolet dpollard samal nickluscombe olympos emptyhb EisenLab EBI-regulation
  • Population-based resequencing of ANGPTL4 uncovers variations that reduce triglycerides and increase HDL
    Nature Genetics, Vol. 39, No. 4. (25 February 2007), pp. 513-516.
    by Stefano Romeo, Len A Pennacchio, Yunxin Fu, Eric Boerwinkle, Anne Tybjaerg-Hansen, Helen H Hobbs, Jonathan C Cohen
    posted to rare_allele polymorphism metabolism by caseybrown on 2008-04-29 16:55:39 as read along with 1 person caldavis
  • SNP-VISTA: an interactive SNP visualization tool.
    BMC Bioinformatics, Vol. 6 (2005)
    by N Shah, MV Teplitsky, S Minovitsky, LA Pennacchio, P Hugenholtz, B Hamann, IL Dubchak
    posted to community-genomics software by jmeppley on 2008-04-02 17:32:26 as ** along with 1 person jyuh
  • Predicting tissue-specific enhancers in the human genome.
    Genome Res (8 January 2007)
    by Len A A Pennacchio, Gabriela G G Loots, Marcelo A A Nobrega, Ivan Ovcharenko
    posted to tissue_specific_nw by roys on 2008-03-17 04:59:05 as ** along with 5 people and 1 group indigoviolet cwbrown maximilianh heliopais barwil EisenLab
  • Medical sequencing at the extremes of human body mass.
    Am J Hum Genet, Vol. 80, No. 4. (April 2007), pp. 779-791.
    by N Ahituv, N Kavaslar, W Schackwitz, A Ustaszewska, J Martin, S Hebert, H Doelle, B Ersoy, G Kryukov, S Schmidt, N Yosef, E Ruppin, R Sharan, C Vaisse, S Sunyaev, R Dent, J Cohen, R McPherson, LA Pennacchio
    posted to association sequencing by lp2 on 2008-03-12 16:43:29 as ** along with 2 people balicea ramensky
  • In vivo enhancer analysis of human conserved non-coding sequences
    Nature
    by Len A Pennacchio, Nadav Ahituv, Alan M Moses, Shyam Prabhakar, Marcelo A Nobrega, Malak Shoukry, Simon Minovitsky, Inna Dubchak, Amy Holt, Keith D Lewis, Ingrid Plajzer-Frick, Jennifer Akiyama, Sarah De Val, Veena Afzal, Brian L Black, Olivier Couronne, Michael B Eisen, Axel Visel, Edward M Rubin
    posted to conserved enhancerprediction by maximilianh on 2008-02-29 17:30:33 as ** along with 3 people cckan heliopais gjuggler
  • Ultraconservation identifies a small subset of extremely constrained developmental enhancers.
    Nat Genet (6 January 2008)
    by Axel Visel, Shyam Prabhakar, Jennifer A A Akiyama, Malak Shoukry, Keith D D Lewis, Amy Holt, Ingrid Plajzer-Frick, Veena Afzal, Edward M M Rubin, Len A A Pennacchio
    posted to no-tag by Stew on 2008-02-29 12:21:51 as ** along with 3 people maximilianh gjuggler emptyhb
  • Enhancer identification through comparative genomics
    Seminars in Cell & Developmental Biology, Vol. 18, No. 1. (February 2007), pp. 140-152.
    by Axel Visel, James Bristow, Len A Pennacchio
    posted to comparative enhancer_finding review by brant on 2008-02-24 04:22:07 as **
  • Deletion of Ultraconserved Elements Yields Viable Mice
    PLoS Biology, Vol. 5, No. 9. (1 September 2007), e234.
    by Nadav Ahituv, Yiwen Zhu, Axel Visel, Amy Holt, Veena Afzal, Len A Pennacchio, Edward M Rubin
    posted to ultraconserved by gjuggler on 2008-02-22 14:50:45 as ** along with 7 people and 3 groups balicea dchughes cwbrown djkt lp2 cabbagezs Stew EisenLab G4ID Genetics-of-Gambling
  • Deletion of Ultraconserved Elements Yields Viable Mice
    PLoS Biology, Vol. 5, No. 9. (1 September 2007), e234.
    by Nadav Ahituv, Yiwen Zhu, Axel Visel, Amy Holt, Veena Afzal, Len A Pennacchio, Edward M Rubin
    posted to functional mouse mutation selection ultraconserved by aprasad on 2007-09-04 21:56:41 as **
  • A Common Allele on Chromosome 9 Associated with Coronary Heart Disease
    Science, Vol. 316, No. 5830. (8 June 2007), pp. 1488-1491.
    by Ruth Mcpherson, Alexander Pertsemlidis, Nihan Kavaslar, Alexandre Stewart, Robert Roberts, David R Cox, David A Hinds, Len A Pennacchio, Anne Tybjaerg-Hansen, Aaron R Folsom, Eric Boerwinkle, Helen H Hobbs, Jonathan C Cohen
    posted to association disease genome heart wide by joepickrell on 2007-06-13 15:55:03 as **
  • Most rare missense alleles are deleterious in humans: implications for complex disease and association studies.
    Am J Hum Genet, Vol. 80, No. 4. (April 2007), pp. 727-739.
    by GV Kryukov, LA Pennacchio, SR Sunyaev
    posted to association_studies nssnps by ramensky on 2007-05-28 20:39:53 as ****
  • notes The DNA sequence and biology of human chromosome 19.
    Nature, Vol. 428, No. 6982. (1 April 2004), pp. 529-535.
    by J Grimwood, LA Gordon, A Olsen, A Terry, J Schmutz, J Lamerdin, U Hellsten, D Goodstein, O Couronne, M Tran-Gyamfi, A Aerts, M Altherr, L Ashworth, E Bajorek, S Black, E Branscomb, S Caenepeel, A Carrano, C Caoile, YM Chan, M Christensen, CA Cleland, A Copeland, E Dalin, P Dehal, M Denys, JC Detter, J Escobar, D Flowers, D Fotopulos, C Garcia, AM Georgescu, T Glavina, M Gomez, E Gonzales, M Groza, N Hammon, T Hawkins, L Haydu, I Ho, W Huang, S Israni, J Jett, K Kadner, H Kimball, A Kobayashi, V Larionov, SH Leem, F Lopez, Y Lou, S Lowry, S Malfatti, D Martinez, P McCready, C Medina, J Morgan, K Nelson, M Nolan, I Ovcharenko, S Pitluck, M Pollard, AP Popkie, P Predki, G Quan, L Ramirez, S Rash, J Retterer, A Rodriguez, S Rogers, A Salamov, A Salazar, X She, D Smith, T Slezak, V Solovyev, N Thayer, H Tice, M Tsai, A Ustaszewska, N Vo, M Wagner, J Wheeler, K Wu, G Xie, J Yang, I Dubchak, TS Furey, P DeJong, M Dickson, D Gordon, EE Eichler, LA Pennacchio, P Richardson, L Stubbs, DS Rokhsar, RM Myers, EM Rubin, SM Lucas
    posted to no-tag by Iden-J_GluR on 2007-01-19 15:28:03 as **
  • Phylo-VISTA: interactive visualization of multiple DNA sequence alignments.
    Bioinformatics, Vol. 20, No. 5. (22 March 2004), pp. 636-643.
    by N Shah, O Couronne, LA Pennacchio, M Brudno, S Batzoglou, EW Bethel, EM Rubin, B Hamann, I Dubchak
    posted to dna visualization by plofje on 2007-01-05 12:35:17 as **
  • Insulin-mediated down-regulation of apolipoprotein A5 gene expression through the phosphatidylinositol 3-kinase pathway: role of upstream stimulatory factor.
    Mol Cell Biol, Vol. 25, No. 4. (February 2005), pp. 1537-1548.
    by M Nowak, A Helleboid-Chapman, H Jakel, G Martin, D Duran-Sandoval, B Staels, EM Rubin, LA Pennacchio, MR Taskinen, J Fruchart-Najib, JC Fruchart
    posted to insulin pi3k usf by beccaf22 on 2005-03-25 04:18:05 as **
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